Rhagoletis zephyria (snowberry fruit fly): 108379560
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Entry
108379560 CDS
T08513
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108379560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108379560
Enzymes [BR:
rze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108379560
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108379560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Rpr2
Motif
Other DBs
NCBI-GeneID:
108379560
NCBI-ProteinID:
XP_017491403
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MTDKTLVAELTEEIGSIAAKPTQKLISSQLWNDLGRQQTKTLQNLAKAHIESFNFMINEG
IQKGIQNIQPMGFQLPNGDRVVIQIIACSIFPPCVNNDSKTSSSALFPSECRMRKISYKG
KLMVTMNWSLNGKVQDIIEDIVGDIPIMVKSARCNIEKLSRTELIRHKEDEEEFGGYFIM
NGNEYLIRKLIAQRRNYPMAISRNSWKDSGQFFSEFGVSIRCVRNDQIGANMVMHYLTNG
TIKLRFFYNRQPIYLPLVLVLKCLLDVSDQYIYNELIRGREEDKFYKNCLVNMLRLVQRE
GLYTARQIRQYIGERVRVRFEAPSWYTDEEITDCLFRECIAIHLNTNVDKFNLLAFMARK
LIAFVQGECAPESPDNPMFHEIYQSGHIYFTLLLERLSIFLTNVRQVIERNYQLAQKSAS
SATTAGYTLTNSTMRKALVSKYFEITRAVEFLVTTGNLRSKSGLGLMQSAGISVKAEKIN
FWRFLAHFRCVHRGQFFTEMKTTACRKLYPEAWGFLCPVHTPDGSPCGLLNHFSELCRIT
NSQAAVGHLTRTLVGLGMEPMAPGPSAAMGPGSHLAVLLDGRPVGFVRLELAAKIAEELR
VMKTTGGGNRQPSGFKGERVPSTLEIGLVPPTEKASQFPGLFLFSTPSRMVRPVYNLATS
AVELIGSFEQCYLDIAVTGAEAVGGAVGGGGGGGGGRATHQELKETAFLSVLARMIPYPD
FNQSPRNMYSCQMAKQTMGTASHTLRYRSDNKMYSVVSPQSPLVRTSAYDHYQLDNYPLG
TNAVVAVCSYTGYDMEDAMIINKASMERGFKAGLIHKTEVVDLREVAGISSRSSDIQFTF
GYKDYEERFEGLFDGDGLPFVGRKVVQDDPVCAYVDLVKGETKLHKYKSSEPAFIYDVKI
LGNESGSDTVVQRVAITYLIRRDPIIGDKFANRHGQKGICSFLWPAEDMPFTEGGIIPDI
LFNPHGFPSRMTIGQMIETMAGKSGAMHGLVHDSTPFVFSEDNVASDYYGKLLEGAGFNY
YGTERLYSGVDGRRLEASIFIGVVYYIRLRHMVGDKYQVRSTGPIDQITHQPVKGRKRAG
GIRFGEMERDSLLAHGTTFLLQDRLFNCSDKTLVHMCRKCGSLISPYLSKTRAEQSSSLA
TGIDDDSAQSPFWTCKTCESPENIVKVAIPFVLQYLVSELASVNIKVHFSAS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagacgctcgtcgccgagctgacggaggagattggctcaatagcggcgaag
ccgacgcagaagctgatcagcagccagctgtggaatgacctgggcaggcagcagacgaag
acgttgcaaaacctggccaaggcgcacatcgagtccttcaacttcatgatcaacgagggc
atccagaagggcattcagaacattcagccgatgggctttcagctgcccaacggagaccgg
gtggtcatacagattattgcgtgctccatctttcccccctgcgtgaacaacgacagcaag
accagctccagtgcgctctttccctcggagtgccgcatgcggaagatctcctacaagggc
aagctgatggtgacgatgaactggagtctgaatgggaaggtgcaggacatcatcgaggac
atcgtgggcgacattcccatcatggtcaagtcggcgcgctgtaacatcgagaagctgagc
cgaacggagctgatcaggcacaaggaggacgaggaggagttcggcgggtacttcatcatg
aacggcaatgagtacctcattcgcaagttgattgcccagcggcggaactatccaatggcc
atctctcggaactcgtggaaggacagcggccagttcttctccgagtttggcgtctccatt
cgctgcgtgcgcaatgaccagattggagcgaacatggtcatgcactacctgacgaatggg
accatcaagctgcgcttcttctacaaccgccagccgatctacctgccgctggttctggtc
ctcaagtgcctgctcgacgtctccgaccagtacatctacaatgagctgatccgagggcgg
gaggaggacaagttctacaagaactgcctggtcaatatgctgcggctggtgcagcgggag
ggcctgtacacggcgcggcagattcgccagtacatcggcgagcgggtgagggtgcgcttt
gaggcgccctcctggtacaccgatgaggagatcaccgactgtctctttcgggagtgcatc
gccatccacctgaacaccaacgtggacaagttcaacctgctggccttcatggcccggaag
ctgatcgccttcgtccagggcgagtgcgccccggagagtcccgacaatccgatgttccac
gagatctaccagagtgggcacatctactttacgctcctcctcgaacggctctccatcttc
ctcaccaacgtccgccaggtgattgagcggaactaccagctggcgcaaaagtccgcctcc
agtgccaccactgccggctacacgctgaccaactcgacgatgcgcaaggccctcgtctcg
aagtactttgaaattacccgggcggtggagtttctggtgacgacgggcaatctgcggtca
aagagcggcctcggcctgatgcagtccgcgggcatcagcgtcaaggcggagaagatcaac
ttttggcgcttcctcgcccactttcgctgcgtccaccggggccagttcttcaccgagatg
aagaccaccgcctgtcggaagctctaccccgaggcgtggggcttcctctgtccggtgcac
acgccggacgggtcgccctgcgggctgctgaaccactttagcgagctctgtcggattacc
aactcgcaggcggcggtgggccatctgacgcggacgctggtcggtctgggcatggagccg
atggcgccggggcccagcgcggcgatgggccccggcagccacctggcggtgctcctggac
ggccggccggtgggctttgtccgcctggagctggcggcgaagattgccgaggagctgcgg
gtgatgaagaccaccggtggtggaaacaggcaaccgagcggcttcaagggagaacgcgtg
ccctccacgctggagattggcctggtgccgccgacggagaaggcgagccaattccccggg
ctctttctcttctcgacgccctcgcggatggtccgccccgtctacaacctggccacctcg
gcggtggagctgatcggcagctttgagcagtgctacctcgacattgccgtcaccggggcg
gaggcggtgggcggtgccgtgggagggggcggcggcggcggcggtgggcgggcaacccac
caggaactgaaggagacggccttcctctccgtcctggcccggatgatcccctaccctgac
ttcaatcagtcaccccgcaacatgtacagctgtcagatggcgaagcagacgatgggcacg
gcgagccacacgctgcgctaccgctccgacaacaagatgtactcggtggtcagtccgcag
tcgccgctggtccggaccagcgcctacgaccactaccagctggacaactacccgctgggg
acgaacgccgtggtggccgtctgcagctacaccggctacgacatggaggacgccatgatc
atcaacaaggcgagcatggagcgcggcttcaaggcgggcctgattcacaagaccgaggtg
gtggacttgagggaggtggcgggcatcagcagtcgctcctcggacattcagttcaccttt
ggctacaaggactacgaggagcgctttgaggggctgtttgacggcgatgggctgcccttc
gtggggcggaaggtggtccaggacgacccggtgtgcgcctacgtcgacctggtgaagggc
gagacgaagctgcacaagtacaagtcgagtgagccggccttcatctacgacgtgaagata
ctgggcaacgaaagtggtagtgatacggtggtgcagcgagtggccatcacctacctgatc
cgccgagacccgatcatcggcgacaagttcgccaatcggcacggacagaagggcatctgc
tccttcctctggcccgccgaggacatgcccttcaccgagggcggcatcattccggacatt
ctcttcaacccgcacggcttcccctcccgtatgaccatcggccagatgattgagacgatg
gcgggcaagagcggggcgatgcacggcctggtccacgactcgacgcccttcgtcttcagc
gaggacaatgtcgcctccgactactacggaaagctgctggagggcgccggcttcaactac
tacggcacggagcggctgtacagcggcgtcgacgggcgccggctggaggcctccatcttc
atcggcgtcgtctactacatccgactgcggcacatggtcggcgacaagtaccaggtgcgg
tccaccgggccgattgaccagatcacccaccagccggtgaagggacggaagagggcgggt
ggtattcgatttggtgagatggagcgagattcgctgctcgcccacgggacgacctttctc
ctgcaggatcgactctttaactgcagtgataagacgctggtgcacatgtgccgaaagtgt
ggctcgctgatctccccgtacctctcgaagacccgtgccgagcagtcctcctcgctggcc
accggcatcgacgacgacagcgcgcagagtcccttctggacgtgcaagacctgcgagtcg
ccggagaacatcgtcaaggtggccattccctttgtcctgcagtacctcgtctcggagttg
gcctccgtcaacatcaaggtccacttttctgctagttga
DBGET
integrated database retrieval system
