KEGG   Staphylococcus aureus RF122: SAB2012c
Entry
SAB2012c          CDS       T00303                                 
Symbol
rpoE
Name
(GenBank) probable DNA-directed RNA polymerase delta subunit
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
sab  Staphylococcus aureus RF122
Pathway
sab03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SAB2012c (rpoE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sab03021]
    SAB2012c (rpoE)
   03400 DNA repair and recombination proteins [BR:sab03400]
    SAB2012c (rpoE)
Transcription machinery [BR:sab03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SAB2012c (rpoE)
DNA repair and recombination proteins [BR:sab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SAB2012c (rpoE)
SSDB
Motif
Pfam: HARE-HTH
Other DBs
NCBI-ProteinID: CAI81701
UniProt: Q2YUM5
LinkDB
Position
complement(2143888..2144418)
AA seq 176 aa
MKIQDYTKQMVDEKSFIDMAYTLLNDKGETMNLYDIIDEFRALGDYEYEEIETRVVQFYT
DLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDVLDADDEEDQNLKLLGEDEMD
DDDDIPAQTDDQEELNDPEDEQVEEEINHSDIVIEEDEDELDEDEEDFEDEEDFKA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgaaaattcaagattatacaaaacaaatggttgatgaaaaatcatttattgatatggct
tatacattattgaatgataaaggtgaaacaatgaacttatatgatatcatcgatgaattt
agagcattaggtgattatgagtatgaggaaattgaaactcgtgttgtacaattttacaca
gatttaaatacagatggacgttttttaaatgttggtgaaaacttatggggattacgtgac
tggtactcagtagatgatatcgaagagaaaattgcaccaacaattcaaaaatttgatgtt
ttagacgccgatgatgaagaagatcaaaacttaaaattattgggtgaagatgaaatggat
gatgatgacgatattccagctcaaactgatgatcaagaagaattaaatgatcctgaagat
gagcaagttgaagaagaaatcaatcattcggatatagtcattgaagaagatgaagatgaa
ctagatgaagacgaagaagattttgaagacgaagaagacttcaaagcataa

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