Sphingomonas abietis: PBT88_08640
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Entry
PBT88_08640 CDS
T09690
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sabi
Sphingomonas abietis
Pathway
sabi00190
Oxidative phosphorylation
sabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PBT88_08640
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBT88_08640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sabi03019
]
PBT88_08640
Enzymes [BR:
sabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PBT88_08640
Messenger RNA biogenesis [BR:
sabi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PBT88_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WBO24156
LinkDB
All DBs
Position
1770554..1772788
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AA seq
744 aa
AA seq
DB search
MTEHSEQPHSDNPALAPATTETIAQAVADIRSHHDQPVIDPVAPRERYFNRELSWLAFNE
RVLDEACNTAHPLLERLRFLSISGANLDEFFMVRVAGLRGQQLNAVEHLSADGLTPAQQL
GAIGESADGLMRRQQVVWRTIRHELAAQDFHVLSNDKIDAESSRWLEVYFREQVLPVLTP
QALDPAHPFPFIPNKGFSLIFDLKRISDGEPIRELLMIPTTLPRFVRLPGDIARYVSIEN
LIRRFTALLFPGYELLGDGAFRVIRDSDIEIEEEAEDLVRYYNTAIKRRRRGRVIRLRME
GGMPEVLEKHVCEAAGQGAIVSEATGFLGVADLDQLTDENRPDLKWPPYTPRFPERIREH
DGDCFAAIRDKDIVVHHPYESFEVVIAFLKQAAQDPDVVAIKQTLYRAGKQSAIIRALID
AAEAGKSVTAVVELKARFDEEQNIMWASQLERAGVQVVYGFTNWKTHAKISMVVRRENGS
FRTYCHFGTGNYHPVTAKIYTDISFFTADPRVARDAGQVFNYITGYVEPHDLELVTISPH
GLREKLAAMIDAEIDHVRAGRPGTIWAKMNSLVDPAIIEKLYRASAAGVQIDLIVRGICC
LRPGVPGLSENIRVKSVVGRFLEHSRIFCFGDGEQMPNPKAKVFISSADWMPRNLDRRVE
YMLPIENPTVHEQILGQVMVANLIDTEQSWLLKPDGSYDRVSDAGGKPFNLHRYFMTNPS
LSGRGAALKKSEGVPRLKLRRGGA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcatagcgaacagccccactccgacaatccggccctggcgccggccacgacc
gaaacgatcgcgcaggcggtggcggatatccgcagccatcacgatcagcccgtgatcgat
ccggtggcgccgcgcgaacgctatttcaaccgcgagctttcgtggctcgccttcaacgag
cgcgtgctcgacgaggcgtgcaacaccgcgcatccgctgctcgagcggctgcgtttcctg
tcgatctcgggcgccaatctcgacgaattcttcatggtccgcgtcgccggcctgcgcggc
cagcagctgaatgcggtggagcatctctcggccgacgggctcacccccgcccagcagctc
ggcgcgatcggcgagagcgcggacgggctgatgcggcgccagcaggtggtgtggcggacg
atccgccatgaactggccgcgcaggatttccacgtcctgtccaacgacaagatcgacgcc
gagtcgtcgcgctggctggaggtctatttccgcgagcaggtgctgccggtgctgaccccg
caggcgctcgaccccgcccacccgtttccgttcatccccaacaagggcttcagcctgatc
ttcgatctgaagcgcatctcggacggggagccgatccgcgaactgctgatgatcccgacg
acgctgccgcgattcgtgcgcctgcccggtgacattgcgcgctacgtctcgatcgagaat
ctgatccgacgcttcaccgccctgctgttccccggctacgaactgctcggcgacggcgcc
ttccgggtgatccgcgacagcgatatcgagattgaggaagaggccgaggatctcgtccgc
tactataacaccgcgatcaagcgtcgccggcgcgggcgggtgatccggctgcgcatggag
ggcggaatgcctgaggtgctggagaagcatgtctgcgaggcggccgggcagggcgcgatc
gtgtccgaggcgaccggcttcctcggcgtcgccgatctcgaccagctgaccgacgagaac
cgccccgatctcaaatggcccccctatacgccgcgctttcccgagcggattcgcgagcat
gacggcgattgcttcgccgcgatccgcgacaaggacatcgtcgtccatcacccctatgaa
tccttcgaggtggtgatcgccttcctcaagcaggcggcgcaggatcccgatgtggtggcg
atcaagcagacgctctaccgcgccggcaagcagtccgcgatcatccgcgcgctgatcgat
gcggccgaggcgggcaagtcggtcaccgccgtggtcgagctgaaggcgcgcttcgacgaa
gagcagaacatcatgtgggcgagccagctggagcgcgccggcgtgcaggtggtctatggc
ttcaccaactggaagacccacgccaagatcagcatggtggtgcgccgcgaaaatggctcg
ttccgcacctactgccatttcgggaccggcaactatcatccggtgacggcgaaaatctat
acggatatcagcttcttcaccgccgatcctcgcgtcgcgcgcgatgccgggcaggtgttc
aactacatcaccggctatgtcgagccgcacgatctggaactggtgacgatctcgccgcac
gggctgcgcgagaagctggcggcaatgatcgacgccgagatcgatcatgtccgcgccggg
cggccggggacgatctgggccaagatgaactcgctggtcgatcccgcgatcatcgagaag
ctctaccgggcgagcgcggcgggcgtgcagatcgatctgatcgtgcgcggcatctgctgc
ctgcgcccgggcgtgccgggcctttccgagaatatccgcgtcaagtcggtggtcgggcgc
tttctggagcatagccgcatcttctgcttcggcgacggcgaacagatgcccaatccgaag
gccaaggtgttcatctcctcggctgactggatgccgcgcaatctcgatcgtcgcgtcgaa
tatatgctgccgatcgagaaccccacggttcatgagcagatcctcgggcaggtgatggtc
gccaatctgatcgacaccgagcagagctggcttctgaagcccgatggaagttacgatcgt
gtttccgatgcgggtggcaagccgttcaatctccatcgctatttcatgaccaacccgtcg
ctttccgggcgtggcgcggcgttgaagaaatcggagggcgtgccccggctcaagctgcgc
cggggcggcgcctga
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