Sphingomonas abietis: PBT88_12800
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Entry
PBT88_12800 CDS
T09690
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sabi
Sphingomonas abietis
Brite
KEGG Orthology (KO) [BR:
sabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sabi03009
]
PBT88_12800 (rimO)
Enzymes [BR:
sabi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PBT88_12800 (rimO)
Ribosome biogenesis [BR:
sabi03009
]
Prokaryotic type
ribosomal protein modification factors
PBT88_12800 (rimO)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBO21082
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All DBs
Position
2699789..2701156
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AA seq
455 aa
AA seq
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MATTLPSPPKVGMVSLGCPKNLVDSERILTKLRSDGYAMSADYAGADIVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEMIRARFPDVLAVTGAHQYEQVVGAVHEAAPV
TPSAYLDLVPQASLPGGDLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAIL
REAEKLVAAGTKELLVISQDTSAYGVDLRHASYPLKGGGPRREATGEVRAHMTDLARALG
QLGAWVRLHYVYPYPHVDQVIPLMAEGLVTPYLDIPFQHAAPAVLKRMKRPANEAKVLER
IKGWRAIAPDIAIRSTFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANAL
SDPVPEEVKEERYQRIMEKTAAISAAKLQAKIGRTLDVIIDVVDGEGATGRSQADAPEID
GEVHLRDAGHLAAGDIVPVTIEDADEHDLFGVPLA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacgctcccctccccgcccaaggtcggcatggtttcgctcggctgtccgaag
aacctcgtcgacagcgaacgcatcctcaccaagctccgctcggatggctatgccatgtcc
gccgactatgccggcgccgacatcgtgctggtcaacacctgcggcttcctcgactccgcc
aaggaagagagcctcgaggcgatcggcgaggcgatcgcggagaatggccgcgtcatcgtc
accggctgcatgggcaaggaagcggagatgatccgcgcgcgcttcccggacgtgctggcc
gtcaccggcgcgcatcaatatgagcaggtcgtcggcgcggtccacgaggcggcgccagtg
acgccctcggcctatctcgatctggtgccgcaggcgtcgctgccgggcggcgacctcaag
ctgaccccgcgccactacagctatctgaagatctcggagggctgcaaccaccgctgttcc
ttctgcatcatcccgagcctgcgcggcgacctcgtcagccgccgcccggatgcgatcctg
cgcgaagccgagaaactggtcgcggccggcacgaaggaattgctggtcatcagccaggac
acctcggcctatggcgtcgacctgcgccacgcttcctatccgctgaagggcggtggcccc
cgccgggaggcaacgggagaagtgcgcgcccacatgaccgatctggcgcgcgctctgggc
cagctcggagcgtgggtgcggctgcattatgtctatccctatccgcatgtcgatcaggtg
atcccgctgatggcggaggggctggtgacgccctatctcgacatcccgttccagcatgcg
gcccctgccgtgctgaagcgcatgaagcgcccggccaacgaggccaaggtgctcgagcgg
atcaagggctggcgggcgatcgcccccgacatcgcgatccgatcgaccttcgtggtcggc
ttccccggcgagaccgaggccgatttccagtatctgctcgactggctggacgaagcccag
ctcgatcgcgtcggcgccttccgcttcgagccggtcgagggcgcggccgccaatgcgctg
tccgatccggtgcccgaggaggtgaaggaagaacgctaccagcgcatcatggagaagacc
gccgcgatctcggcggccaagctccaggccaagatcggccgcacgctggacgtgatcatc
gacgtggtggacggcgaaggcgccaccggccgctcgcaggccgacgcgccggagatcgac
ggcgaggtccatctgcgcgacgccgggcatctggcggcgggcgacatcgtgccggtcacg
atcgaggatgccgacgagcatgacctgttcggggtgccgctggcctga
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