Allosaccharopolyspora coralli: GIY23_16590
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Entry
GIY23_16590 CDS
T06288
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sace
Allosaccharopolyspora coralli
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sace03009
]
GIY23_16590 (rimO)
Enzymes [BR:
sace01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GIY23_16590 (rimO)
Ribosome biogenesis [BR:
sace03009
]
Prokaryotic type
ribosomal protein modification factors
GIY23_16590 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QGK70919
UniProt:
A0A5Q3QHH9
LinkDB
All DBs
Position
complement(3557227..3558675)
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AA seq
482 aa
AA seq
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MSVEQKAGGAGTRRVAMVTLGCARNEVDSEELAGTLGSGGWDLVDDENDADVVVVNTCGF
VESAKKDSVDTLLAASDGGAKVVAVGCMAERYGTELAEQMPEADAVLGFDHYGELAERLD
DVLDGRSVAAHAPRDRRTLLPITPVERPGAAAADEVSIPGHGWVPSTRRSARRRLDDTPV
AALKLASGCDRRCSFCAIPSFRGAFVSRPPQEVVDEGAWLAEQGARELFLVSENSTSYGK
DLSDPRALEVLLPGLAALNGVDRVRVSYLQPAETTPGLLRAIATTPGVARYFDLSFQHSN
ERVLRRMRRFGSTESFLDLIERIRALAPEAGIRSNVIVGFPGETEDDLAELHDFLTRARM
DAVGVFGYSDEDGTEAEGFDGKVHPDEVARRVERTSRLVEELIAQRAEDRVGTRVDVLVE
RLASDEQECAGRAEHQGPEVDGECLVVDPGAAVVGELLRCEVVDTEGVDLVVRPVDVREA
PA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgagcagaaggccggtggcgccggcacccgccgcgttgccatggtcacgctc
ggctgtgcccgcaacgaggtcgattccgaggaactcgcgggaaccctcggctcgggcggc
tgggacctggtcgacgacgagaacgacgccgacgtggtggtggtcaacacctgcggcttc
gtggagtcggcgaaaaaggactccgtcgacacgttgctggccgcctccgacggcggcgcg
aaggtcgtcgcggtcgggtgcatggccgagcgctacggcaccgaactcgccgagcagatg
cccgaggccgacgcggtgctgggattcgatcattacggcgagctggcggagcgactcgac
gacgtgctcgacggacgttccgtcgccgcgcacgctccgcgggaccggcggacgttgctg
cccatcacgccggtcgagcgtcccggcgcggcggcggccgacgaggtctcgatccccggt
cacgggtgggtgccctcgacgcgtcgttccgctcgccgacggctggacgacacgccggtg
gcagcgctgaaactggcctccggctgcgaccggcgctgctcgttctgcgccatcccgtcc
ttccgcggagccttcgtgtcccggccgccgcaggaggtcgtcgacgagggggcctggctc
gccgagcaaggcgcgcgtgagttgttcctggtcagtgagaactccacgtcctacggcaag
gatctctccgacccgcgtgcgctggaggtgttgctgcccggtctcgccgcgctcaacggc
gtcgaccgggtccgcgtctcgtacctgcaacccgccgagaccacacccggactgctccgg
gccatcgccacgaccccgggtgtggcgcgctacttcgacctctcgttccagcactcgaac
gagcgggtgctgcgccggatgcggcggttcggctcaaccgagtcgttcctggacctgatc
gaacgaatccgcgcactcgcccccgaagcgggaatccgcagcaacgtcatcgtcgggttc
cccggcgagaccgaggacgatctcgcggaactgcacgacttcctcacccgtgcccgcatg
gatgcagtcggcgtgttcggctattccgacgaggacggcaccgaggcggagggtttcgac
ggcaaggtgcatccggacgaggtcgcccgtcgggtcgagaggacctcgcgactcgtcgag
gagctcatcgcccagcgcgccgaggaccgcgtcggcacccgggtcgacgtcctcgtcgag
cggctcgcctccgacgaacaggagtgcgcgggccgcgccgagcatcagggcccggaggtc
gacggcgaatgcctcgtcgtcgatcccggcgcggcggtggtgggggaactgctgcggtgc
gaggtggtcgacaccgaaggggtggacctggtggtccgtccggtcgacgtgcgcgaggca
ccggcatga
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