Sphingomonas aerolata: NEF64_12080
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Entry
NEF64_12080 CDS
T08450
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saer03009
]
NEF64_12080 (rimO)
Enzymes [BR:
saer01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NEF64_12080 (rimO)
Ribosome biogenesis [BR:
saer03009
]
Prokaryotic type
ribosomal protein modification factors
NEF64_12080 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
USQ99190
LinkDB
All DBs
Position
2668869..2670197
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AA seq
442 aa
AA seq
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MATILPTPPKIGMVSLGCPKNLVDSERILTQLRGDGYQMSPDYAGADVVLVNTCGFLDSA
KEESLEAIGEAIAENGRVIVTGCMGKEAEAIRARFPQVLAITGAHEYEQVVGAVHEAAPM
PPSAFLNLIPDAGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LVAAGTKEMLVISQDTSAYGVDLRHSVWPLKGGGEVRAHMTDLARELGKIAPWVRLHYVY
PYPHVDHVIPLMAEGLVLPYLDIPFQHAAPAVLRRMKRPGNDAKVLQRIHKWREIAPDIT
IRSTFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVEGAVANLLPDHVPEELKEER
YARIMEKTAAISAAKLQAKIGRTLDVIIDVVDDEGATGRSQADAPEIDGEVFLRDAGHLT
VGDIVPVTIEDADDHDLYGVPV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatactccccactccgcccaagatcggcatggtctcgctcggctgtccgaag
aacctcgtcgacagcgagcggattctcacgcagctgcgcggtgacggctatcagatgtcg
cccgactatgccggtgccgacgttgtcctcgtcaatacctgcggctttctcgattcggcg
aaggaggaaagcctcgaggcgatcggcgaagccatcgccgagaacggccgtgtcatcgtc
accggctgcatgggcaaggaagccgaggcgatccgcgcgcgcttcccgcaggtgctcgcg
atcaccggtgcgcatgaatatgagcaggtcgtcggcgcggtccacgaagccgctccgatg
ccgccctccgcattccttaacctgattccggatgccgggctcaagctgacgccgcgccac
tacagctatctgaagatctccgagggctgcaaccatcgctgctccttctgcatcatcccg
agcctgcgcggcgatctcgtcagccgtcgtcccgacgcgatcctgcgcgaagccgaaaaa
ctggtcgccgcgggtacgaaggagatgctggtcatcagccaggacacgtcggcctatggc
gtcgacctgcgccactcggtctggccgttgaagggtggcggcgaggttcgtgcgcacatg
accgatctcgcgcgcgaactcggcaagatcgcgccgtgggtgcggctgcattacgtttac
ccctatccgcacgtcgaccacgtcatcccgttgatggcggagggcttggtgctgccctat
ctcgacattccgttccagcatgccgcgccagcggtgctgcgccggatgaagcgcccaggc
aacgacgccaaggtgctccagcgcattcacaaatggcgtgagatcgcgcccgacatcacg
atccgctcgaccttcgtcgtcggcttccccggcgagaccgaggaggatttccagtatctg
ctcgactggctcgacgaggcgcagctcgaccgcgtcggcgcgttccggttcgaaccggtc
gagggcgcggtcgccaacctgctgccggaccacgtgcccgaggagctcaaggaagagcgc
tacgcccggatcatggaaaagactgcggcgatctcggcagcgaagttgcaggcaaagatc
ggccggacgctcgacgtgatcatcgacgtggtcgacgacgagggggcgacgggtcgctca
caggcggatgcgcccgaaatcgacggcgaggtcttcctgcgcgacgcgggtcacctgacg
gtcggcgacatcgtacccgtgacgatcgaagatgccgacgaccatgatctgtacggcgtg
ccggtctga
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