Spiractinospora alimapuensis: J4H86_07930
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Entry
J4H86_07930 CDS
T07850
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saiu03009
]
J4H86_07930 (rimO)
Enzymes [BR:
saiu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J4H86_07930 (rimO)
Ribosome biogenesis [BR:
saiu03009
]
Prokaryotic type
ribosomal protein modification factors
J4H86_07930 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
OmpA
Motif
Other DBs
NCBI-ProteinID:
QVQ53641
LinkDB
All DBs
Position
complement(1733400..1734866)
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AA seq
488 aa
AA seq
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MAPSRTVSLVTLGCARNEVDSEELAGRLSADGWNVVDPGERADVVMVNTCGFIDAAKRES
IDTLLDASDDAATVVAAGCMAERYGSELAEALPEATVLSFDDYAQISERLDDARAGRSRP
AHAPRDRRTLLPITPVDRAAADDVHVPGHGSFTSPEPSVPGPASGPRIPRLRFGDGPVAN
LKIASGCDRRCSFCAIPAFRGAYVSRPPEDVLAEAEWLAGQGVRELYLVSENSTSYGKDL
GDLRALEKLLPRLAEVPGIERVRPSYLQPAEIRPGLIDVLTSTPGVTPYFDLSFQHAAEP
VLRRMRRFGGSERFLELLSTIRARAPHAGARANFIVGFPGETERDVAELADFLREARLDA
IGIFGYSDEEGTEAAGLDDKLSDEIIAERANQLNQLAEELMAQRAEERIGTPVSVLVEAE
RGEGWFEARAEHQAPEVDGATLLYASTPYAPGDIVSATVVGSDGVDLTAEPDGAGHPVDT
IDDVAERA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcccgtaccgtttcgctggtcactctcggatgcgcgcgcaacgaggtcgac
tccgaagaactcgccggccgcctgagcgcggacggctggaacgtcgtcgaccccggtgag
cgagccgacgtggtcatggtgaatacctgtggattcatcgacgccgcgaaacgggagtcc
atcgacaccctgctcgacgcgtccgacgatgccgcgaccgtcgtggcggctggctgcatg
gccgaacgctacggctccgaactcgccgaggccctgcccgaggcgacggtgctgagcttc
gacgactacgcccagatctccgagcgtctggacgacgcacgggccgggcggagccgaccg
gcacacgctccacgtgaccgcaggaccctgctcccgatcacaccggtggaccgtgccgcc
gccgacgacgtgcacgtgcccggccacggctccttcaccagccccgagccctcggtcccc
ggccccgcgtcgggcccgcggatccctcgactgcgcttcggtgacggcccggtggcgaac
ctgaagatcgcctcggggtgcgaccgccgttgctccttctgcgcgatccccgcgttccgc
ggggcctacgtctcccgtccgcccgaggacgtgctggccgaggccgagtggctcgccggc
cagggggttcgggagctgtacctggtgagtgagaactccacctcctacggcaaggacctg
ggggacctgcgggcgttggagaagctcctgccccgactggccgaggtccccgggatcgag
cgcgtccgcccgagctacctgcagcccgccgagattcggccgggcctgatcgacgtcctc
acctccaccccgggcgtgaccccgtacttcgacctgtccttccagcacgcggcggagccc
gtactgcgccgcatgcggcgtttcggtggcagcgagcggttcctggagctgctctcgacc
attcgtgcccgtgccccccacgccggggcgcgcgcgaacttcatcgtcggtttccccggc
gagaccgagcgcgacgtggcggagctcgccgacttcctgcgcgaggcgcgactggacgcg
atcgggatcttcgggtactccgatgaggaggggaccgaagcggcgggacttgacgacaag
ctctcagacgagatcattgccgaacgggccaaccagctcaaccaactcgcggaggagctc
atggcgcaacgtgcggaggaacggatcggcacccccgtctccgtcctcgtcgaggcggag
cgcggcgagggatggttcgaggcgcgggccgaacaccaggcgccggaggtcgacggagcg
accctcctgtacgcctccacgccctacgcgcccggggacatcgtgtccgcgaccgtggtg
ggctccgacggagtggatctcacggccgagcccgacggcgccggtcaccccgttgacacc
atcgacgacgtcgcggagcgcgcgtga
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