Sphingopyxis alaskensis: Sala_3135
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Entry
Sala_3135 CDS
T00361
Name
(GenBank) Lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal00906
Carotenoid biosynthesis
sal01100
Metabolic pathways
sal01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Sala_3135
Enzymes [BR:
sal01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
Sala_3135
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
NAD_binding_9
NAD_binding_8
FAD_binding_2
Pyr_redox_2
FAD_oxidored
Thi4
Trp_halogenase
pPIWI_RE_REase
Motif
Other DBs
NCBI-ProteinID:
ABF54838
UniProt:
Q1GND4
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Position
complement(3286985..3288142)
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AA seq
385 aa
AA seq
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MVGPNIDKCDIAIVGGGLAGGLAALALAAKRPDLDIRLIEPGPVGGNHIWSFFDSDIAKK
DRWLVAPLVRHHWPRYDVRFPAHARTLHMGYKSITGEALAEAVAAALPDGHIIADRAKHV
APDHLLLARGGRLSAKHVLDARGAGKFPTLDCGWQKFVGQALTVKGGHGVEQPVVMDATV
EQLDGYRFVYLLPFDAETLFVEDTYYSDDADLDEMVVRERIAAYAAAQGWQVTATMREES
GVLPVVIAGDFDRLWPESDRTSRIGVRAGMFHATTGYSLPHAVRTAAALPALVGRADLPA
LLRARAQSAWRRQRFYRMLDAMLFRAADPDRRYRIFERFYRLSPRLVARFYAGRSTAADR
LRLLAGKPPVPVGRALSALAKLDWK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtggggccgaacatcgataaatgcgacatcgcgatcgtcggcggcgggcttgcgggc
ggacttgcggcgctggcgctggcggccaagcggcccgatctcgacatacgactgatcgag
ccggggccggtcgggggcaatcatatctggtcctttttcgacagcgacatcgcaaagaag
gaccgctggctcgtcgcgccgctcgtccgccaccactggccgcgctatgacgtgcgcttt
cccgcgcacgcgcggacgctgcacatgggatataaaagcatcaccggcgaagcgctggcc
gaagcggtggcggcggcgctgccggacggccatatcatcgccgatcgcgcgaaacatgtc
gcgcccgaccatctgctgctggcgcgcggcgggcgattgtcggcgaagcatgtcctcgac
gcgcgcggcgcgggcaagtttccgacactggactgcggctggcagaagtttgtcgggcag
gcgctcaccgtgaagggcgggcacggcgtcgaacagccggtggtgatggacgcgacggtg
gagcaattggacggctatcgctttgtctatctcctccccttcgacgccgaaaccctgttc
gtcgaggacacctattacagcgacgacgccgacctcgacgaaatggtggtgcgcgaacgc
attgccgcctatgccgcggcgcagggctggcaggtgacggcgacgatgcgcgaggagagc
ggcgtgttaccagtggtgatcgcgggcgatttcgaccggttgtggccggaatcggaccgc
acgtcacgaatcggcgtgcgcgcagggatgttccacgcgacgacgggttattcgctgccg
cacgccgtacgcaccgcggcggcgctgcccgcgctggtcggtcgcgccgacctgcccgcg
ctgctgcgcgcgcgcgcgcagtcggcgtggcggcgccagcgcttttaccggatgctggac
gccatgctgttccgcgccgccgatcccgataggcgttaccgcattttcgagcgattctat
cgcctgtcgccgcggctcgtcgcgcgcttctatgccgggcggtcgaccgcggcggaccgg
ctgcgcctgcttgcgggaaagccgccggtgccggtcggccgcgcgctgtcggcgcttgca
aaactggattggaaatga
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