Shewanella algae: BS332_16710
Help
Entry
BS332_16710 CDS
T05622
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
salg
Shewanella algae
Pathway
salg00190
Oxidative phosphorylation
salg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BS332_16710
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BS332_16710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salg03019
]
BS332_16710
Enzymes [BR:
salg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
BS332_16710
Messenger RNA biogenesis [BR:
salg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BS332_16710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AXQ15663
UniProt:
A0A5N5TRE5
LinkDB
All DBs
Position
complement(3684491..3686593)
Genome browser
AA seq
700 aa
AA seq
DB search
MSPSVEKFSLDKELSWLSFNERVLQEAADPLVPLVERVRFLGIFSNNMDEFFRVRVAAVR
RSILLSSLQEGRNSSRHLMAKIQTKVLILQERFDAIYGELMRELARHSIFLINEKQLSDF
HSQWLKKHFKDQLKRHITPLILSNRSELFKQLNDDTTYLAVCLYSREKRQYALVEVPTKN
VPRFIQLPAETSKRRKHLILLDNIIRHCVDELFAPFFEYEEIEVFSMKLTRDADFDLTDE
LEQSQLEKLTKGLKKRLTAEPVRLVYDKEMPEHMLSMLTAQLNISNTECLIPGGRYHSFK
DFIGFPNPGRKYLENDKLPALDSAGFSVCANKFDAIRRGDIMLYYPYHKFSHFTELVRQA
AYDPAVKFIKISLYRVARKSHIIQSLIDAVKNGKQVTTVIELRARFDEQANIEWSRVLAE
AGVKVHHGIPSLKVHAKMCLIGREEAGAMRLYGHIGSGNFNEGTARVYTDLSLFTANQEI
AAEIEQVFELIEHPYRRDNFQHLIVSPYDARQKLTGLIEQEIINAQSGIKAAITLKLNNL
VDEAMIQKLYEASSAGVKIRLLIRGMCALIPDIPGISNNIEVFSIVDRFLEHSRVMLFHS
GGENKLFLCSADWMGRNIDNRIEVSTPVYDPGLKQMILDTLALQFTDNIKARVINKDQSN
PYRKRGNKRKVRSQIAIHQYLGNYEKQRQLDLAKPQEPTQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaccgtccgtcgaaaaattttctctggataaggagctttcctggctgtctttcaat
gaaagagtcttgcaggaagcagccgatcctctggttcctctggtggaacgggttcgcttt
ctgggcatattttccaacaacatggatgagttcttccgggtcagggttgctgcggtgcgt
cgctcgattctgttatccagcctgcaggaaggtcgcaactccagccgccatttgatggcc
aagatccaaaccaaggtattgatactgcaagagcgtttcgacgccatttacggcgagtta
atgcgggaactggcaagacacagcatctttctcatcaatgagaaacagctgagcgatttt
catagccagtggctgaagaaacacttcaaggatcagctcaagcgccacatcacgccgctt
atcctcagcaaccgctccgagctgttcaaacaactcaacgatgacaccacctatctggcg
gtgtgcctctacagccgggaaaagcgtcagtacgccctggtggaagtgcccaccaagaat
gtaccgcgtttcatccaactgccggcagaaacctcgaagcgccgcaagcatttgattttg
ctagataacataatcaggcactgtgtcgatgagctattcgcccccttcttcgaatatgaa
gagattgaagtcttctccatgaagctgacccgcgatgccgacttcgatctcaccgatgag
ctggaacagagccaactggaaaagctcaccaagggcctgaaaaagcgcctcaccgccgag
ccagtgcgtctggtgtatgacaaagagatgccggagcatatgctgagcatgcttacggcg
cagctgaatatctccaataccgagtgcctgatccccggcggccgttaccacagcttcaag
gactttatcggctttcccaatccgggacgcaaatacctggaaaacgacaagcttccggca
ctggactcggccggattcagtgtctgtgccaacaagtttgacgccattcgccgcggcgac
atcatgctttattacccctatcacaagttttcccactttaccgagctggtgcgccaggcg
gcctatgatcctgccgtcaagttcatcaaaatcagcctctatcgggtggcgagaaagtcc
catatcatccagtcgctgatagatgcggtgaaaaacggcaaacaggtcaccactgtgatt
gaactcagggcccgtttcgatgagcaggccaatatcgagtggagccgggtgctggccgag
gccggcgtcaaggtacaccatgggatcccaagcttgaaggtccatgccaagatgtgcctt
atcggccgcgaggaagccggtgcaatgcgcctctatggccacattggctcgggtaacttc
aacgagggcacggccagggtgtacaccgacctttcgctgtttaccgccaatcaggaaatt
gccgccgaaatagagcaggtatttgagttgattgagcacccttacagacgggataacttc
cagcatctgatagtttccccctatgatgcgcgccagaagctgaccggccttatcgagcag
gagatcatcaatgcccaaagcggcatcaaggccgccatcaccctcaagctcaataatctg
gtggatgaggcgatgatccaaaagctgtatgaagcttccagcgccggcgtcaaaatccgt
ctgcttattcgcggtatgtgcgcgcttattcccgatattcccgggatcagcaacaatatt
gaggtcttcagcatagtggacagattcctcgagcactcgcgagtgatgctgttccactca
ggcggtgaaaacaaactctttctctgctccgccgactggatggggcgtaatatcgataac
cgtattgaagtcagcaccccggtatatgatccgggcttgaagcagatgatcctcgatacc
ctggcgctgcaatttaccgacaacatcaaggcgcgggtgatcaacaaagatcaatccaac
ccctaccgtaagcggggcaacaagcgtaaggtaagatcccagatagccatacatcagtat
ctgggcaactacgaaaaacagcggcaactggatctggccaagccccaggaaccgacgcaa
tag
DBGET
integrated database retrieval system
