Shewanella algae: BS332_18805
Help
Entry
BS332_18805 CDS
T05622
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
salg
Shewanella algae
Pathway
salg00240
Pyrimidine metabolism
salg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BS332_18805
Enzymes [BR:
salg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
BS332_18805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AXQ15987
LinkDB
All DBs
Position
complement(4167447..4168364)
Genome browser
AA seq
305 aa
AA seq
DB search
MLKQYLDIHPEVQAALEQGKPVVALESTIISHGMPYPQNVETALKVEQIIRDNGAVPATI
AILKGRLKVGMSQEEINYLGKAGEAVIKTSRRDIPFIVAKGADGATTVASTMILAAMAGI
KVFATGGIGGVHRGAQQTFDISADLQELANTDVAVVCAGAKSILDLGLTREYLETQGVPV
VGFQTDKLPAFYTRESDFSVDYRLEQPAEVAAAMKAKWDMGLKGGMVIANPIPHEHALDK
ALIDGAIARAVAEMDEKGIGGKASTPFLLAKVAEITEGHSLTANIELVYNNAKLAAEIAR
EYVAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagtatctggatattcatcctgaagttcaagcagccctggaacaaggcaag
ccggtggtcgcgctggaatcgaccattatttcccatggtatgccgtatccgcagaacgtt
gagacagcgctcaaggtggagcagatcatccgtgataacggcgctgtacccgcaaccatc
gccattctcaagggccgcctcaaagtgggcatgagccaggaagagatcaattacctgggc
aaggccggtgaagccgttatcaaaaccagtcgccgtgacattccctttattgttgccaaa
ggtgcagacggtgccaccacagttgcttctaccatgatcctggcggcaatggccggtatt
aaggtgtttgctaccggtggtatcggcggtgtgcaccgcggcgctcagcaaactttcgat
atctctgccgatttgcaggagctggccaacacagatgtggccgtggtttgcgccggtgcc
aagtctattctggatctgggactgacccgtgaatatctggaaacgcaaggcgtgcctgtc
gttggtttccaaaccgataaactgccggctttctatacccgcgagagtgacttcagtgtc
gactatcgcttggagcagccggcagaagtggctgctgccatgaaagccaagtgggacatg
gggctcaagggcggtatggtgattgctaacccaattcctcacgagcatgcgttggataaa
gcactgatcgatggcgcaatcgcccgcgcagtagctgaaatggatgaaaaaggaataggc
ggcaaggcttcaacgccgttcctgttggccaaagtggccgaaattaccgaaggtcacagc
ctgactgccaacattgaactggtatacaacaatgccaagttggcggctgagattgcccgc
gagtacgtggcccgctaa
DBGET
integrated database retrieval system
