Silicimonas algicola: EF888_09220
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Entry
EF888_09220 CDS
T05779
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
salo
Silicimonas algicola
Pathway
salo00860
Porphyrin metabolism
salo01100
Metabolic pathways
salo01240
Biosynthesis of cofactors
Module
salo_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
EF888_09220 (cobD)
Enzymes [BR:
salo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
EF888_09220 (cobD)
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Paralog
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
AZQ69649
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All DBs
Position
1854714..1855637
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AA seq
307 aa
AA seq
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MLVALAIDAGVGWPDRLYRAIGHPVGWFGRLVSLAEAALNRSHHTPSFRRAAGAASAIAL
ILLAALLAWLVQSLLPNGAAGVLLAGLLAWPLVAARSLHDHVERVATPLVTGDTAAARAA
VAMIVGRNPEALDEAGVARAALESLAENASDGVVAPLFWGALLGLPGIAAYKAANTLDSM
IGHRNERYRDFGWGAARIDDVLNLIPARLTGALIAVASRARGPAFRTMRRDAGLHRSPNA
GWPEASMAGALGVRLSGPRMYDGVPSNDPWLNPVAGDPRPEDLFLGLRIFRRTVLFTAAL
LLLAALF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggcgcttgcgatcgacgcgggcgtcggctggccggatcgcctctaccgcgcc
atcggccacccggtcggctggttcggacggctggtgtccctggccgaggcagccctcaac
cgttcgcatcacacgccatctttccgacgcgcggccggggccgcctccgcgatcgcgcta
attcttctcgcggcgcttctcgcctggctcgttcagtccctcctcccgaatggcgcggcg
ggcgtcctcctcgccggtctcctcgcatggccccttgtcgcggcacggtcgcttcacgac
cacgtcgagcgcgtggcgacgcctctcgtcaccggcgacaccgccgccgcccgcgccgcc
gtcgccatgatcgtgggccgcaaccccgaagcgctggacgaagcgggcgtcgcgcgcgcg
gcgctcgagagccttgccgagaatgcctcggatggtgtcgtagcaccgctgttctggggc
gctcttctgggactgccgggcatcgccgcctacaaggccgccaacaccctcgattcgatg
atcgggcaccggaacgagcgctaccgtgacttcggctggggtgcggcgcggatcgacgac
gtcctgaacctgatcccggcgcggctgacgggggcgctgatcgcggtcgcctcccgcgcg
cgcggccccgccttccgcaccatgcgccgcgacgcgggcctccaccgctcgccgaacgcg
ggctggcccgaggcgtcgatggcgggcgcgctcggcgtgcggctgtcgggcccgcgcatg
tatgacggtgtcccttcgaacgacccctggctcaaccccgtcgcaggcgatccccggccc
gaggacctgttcctcggcctgcgcatcttccggcggacggtgctctttacggctgcgctt
ctccttctcgcggcgcttttctga
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