Salvelinus sp. IW2-2015 (Arctic char): 111949481
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Entry
111949481 CDS
T05762
Name
(RefSeq) hemicentin-1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111949481
04147 Exosome [BR:
salp04147
]
111949481
04090 CD molecules [BR:
salp04090
]
111949481
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111949481
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111949481
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111949481
Exosomal proteins of bladder cancer cells
111949481
CD molecules [BR:
salp04090
]
Proteins
111949481
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Antigens
111949481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
V-set
C1-set
Motif
Other DBs
NCBI-GeneID:
111949481
NCBI-ProteinID:
XP_023822474
LinkDB
All DBs
Position
LG3:complement(5538078..5543246)
Genome browser
AA seq
579 aa
AA seq
DB search
MVLLCTFSLPLLLTCLAGTLASEREQGRTSEETTPYGPSYVKISGVNTVTVEVPYGFQCS
ANCFPACTFTWARGGLTTQGPELNLQLKEQVPPQVLICMAINPTTGKSVTVSKTVNVTAG
PSNIKISGPDILSSGVTSNFSCSADCYPSCSYTWTISSEAQSTVTTKYGQTISVTPDSWE
IAEELICDAQDTVSLLYISTYVTPYVARGPGAILIXGASSVTVGDTYNFVCLVYCTPSCN
FTWTFNGKIFNGDEIQLPIFHKGDKPMVGSKLVVTVDEYRHNEALTCEAKNVASGASAVS
TKILSVTDPISVQPVSQDKPLAHQPFSLQCVGSQNPASILWIKNGLPMAVSGRVSLSPNN
ITMSFSPLLQSDSGLYQCIVSQGGAPIKGVGYQLNVNYGPLQAVIIQSGKGPVGKVLYLL
PGSKTALQCSALCYPTCTYTWIYKGRLAEMNASFSLTPETTMDGGPLSCVAYNSVTNDKS
TANTSVVLIDGPSNVTISGPGALEVGVKASFKCIAQCSPSCSYTWSVYGRTMHGSVVDIT
VNRHVATESFSCEAHNTITGKIGTANETLSVTDSHWCGC
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggttctcctctgcacatttagtctgcctctgctgctcacctgcctggcaggaacactt
gccagtgagagagagcagggcaggacatcggaggaaaccacaccatatgggccgtcctat
gtgaagatcagtggggtgaacacagtgacggtggaggttccctatggcttccagtgctca
gccaattgtttcccagcctgcaccttcacctgggccagaggagggctcaccacccagggc
ccagagctcaacctccagctgaaggagcaggttcctccacaggtcctgatctgtatggct
ataaaccccaccactgggaagtcagtgacggtcagcaaaacagtcaacgtgacggctgga
ccgtccaatataaagatctcaggtcctgatatactgtccagtggagtgacgtccaacttt
tcctgctctgctgattgctacccgtcctgctcctacacctggacaattagttctgaagca
caaagcacagtgaccaccaaatatggtcaaaccatctctgtcacacctgactcctgggag
attgcagaggaattgatctgtgatgctcaggacactgtctcactcctctacatctcaacc
tatgtcacaccttacgtggcccgtggaccgggggccattttgatcaygggtgccagctca
gtgacagtaggagacacttacaactttgtgtgccttgtttactgcaccccctcctgtaac
tttacctggacattcaatggaaagatcttcaatggcgacgagatccagttgcccatcttc
cataagggcgataagccsatggttggcagtaaactggtggttactgttgatgagtacagg
cacaatgaggcactgacgtgtgaggccaaaaatgttgcctcaggggcctctgctgttagc
accaagatcctcagcgtcactgatcctatctccgtacagccggtgtcccaggacaagccc
ttggcacaccagcccttctcactgcagtgtgtgggctctcagaatccagcctccattttg
tggataaaaaatggcctccctatggctgtgtccggcagggtcagtctctcccccaacaac
atcactatgtcttttagtcctctgctccagtctgatagtgggctgtaccaatgcatcgtt
tctcaggggggagcacccatcaaaggggttgggtaccaactgaatgtaaattatggacca
cttcaagctgttatcatccaatctggcaaaggcccagtaggtaaagtcctgtatctcctg
cctggatcaaaaacagcccttcagtgttcggccctgtgctaccccacctgtacctacacc
tggatatacaaggggaggctggcagagatgaacgcctccttctccctcacacctgagacc
accatggacggaggacccctcagctgtgtggcttacaattcagtgaccaatgacaagagc
actgccaatacctcagttgtgttaattgatggaccatctaacgtgaccatctcaggacca
ggtgccctagaggtaggggtcaaggccagcttcaagtgtattgcccagtgctctccctct
tgcagctacacctggagtgtgtatggtcggaccatgcacggcagtgtggttgatataacc
gtcaaccgtcacgtggccactgagtctttcagctgcgaggcacacaacacgatcaccggg
aagataggcacagccaatgagacactcagtgtcacagattctcactggtgtggatgttga
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