Salvelinus sp. IW2-2015 (Arctic char): 111952584
Help
Entry
111952584 CDS
T05762
Name
(RefSeq) zinc finger homeobox protein 4-like
KO
K09378
zinc finger homeobox protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952584
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
111952584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2
zf-H2C2_5
zf-met
Homeobox_KN
Actin_micro
Motif
Other DBs
NCBI-GeneID:
111952584
NCBI-ProteinID:
XP_023827178
LinkDB
All DBs
Position
LG26:complement(27999534..28014222)
Genome browser
AA seq
1990 aa
AA seq
DB search
MTERKRWRERTLHQHLVAKTEEEKQREEAISNQSQTNSKCSLLPRRSQHSSASCTVMASG
TLNNNTLITEMRDTRGVQGSSPNFPLSFIKPQKSALLEYTSTPVTDDRRTDTTHTSLIAN
GDTAKVPKPNNNPKETDGKREVDGEIEGDKDRERDEKLKTVSKYLHPSPSSPGSLNSHMA
LMHSWNSCKMLKCPKCNWHYKSQQTLHAHLREKHPASGGLCVCGGSGEKCVCGVSRGVCV
YCSTGKAHPRLSRGESYVCEYKPYRCGVCDYTTSSKGNLSIHMQSDKHLSNVQVAGHTHP
AHGTHTHSAHNGGYAVRDTAGEQGYGRTHPTVTQPPAHTTPYPSQPPSHGKRWRCEVCDY
ETSIARNLRIHTTSEKHMHNVLRLKQTPNVLQRSYYLAHCRSLPPQLTLLHSIGGEQSLD
MHQLSAEEPVAPDSTLTPSPSPPPSSPSPSPSSSPPPPLSLSPSSPLSCGVFQCLVCSSF
SSDSLESLRSHLSAPCSLPQSEWRSLVAGGCYCRLCGYSTPLRANFTLHCQTDRHRAQYQ
LASHLWEAGDREEFVKLVATGNPVQLKCNLCDFQTTSLEKLKIHSINPQHQASLRXSRFL
QQYDSAVDGGSWLFHCVLCNYSSCSKLHLLRHTHSPGHQKRELHYLQLVRGRSLEEGEGL
AATFTIRKCPSPETGGSIAEGERRDSLSPAKRSFSGLEETQSPLSPKRPRTDQRTTHQQA
TAKCPLCQDTLVYTHLRRHLILIHSVVQDCVDKLMSMVAVELPEILQKETLQMESHSNIK
ESQTNDCNTNSSYTKESLTNEPQTNDYHTKKEKVITAKDVPALLTPPCKDQHPAEDNTSH
LLESPSSPPSPPTLSSLSPSNLPSSTLPPSPPSDAPPPSDCHGYRFRCGRCSLAVRRQKK
LQMHWQYHAMRAATECHLCPRRCRSQEALQRHLLNTHLQDLHLQGTHPDQSGAHIQQPIS
LEGEEEEGESMSEEETDKEEDDEEGEQGKGDEGEEDEKDDPDEEERPSPGVSNSDKGSGQ
QEEETGSEPSPLIKGSNPTLERFLDPARPYKCSFCCESFTQRTILLVHYNSVSHLHRAKA
RRALHDSSPSHADTPQGLEPSPYRCSLAPDPRPYRCRMCRVAYSQSSTLDIHLRSVLHQT
RARGARTQLSLNPHTRQTLVPALVQTTSSSRSPGGGEVSTRGTTPTATRSAPSSPSPCSS
LSEAQLSVGVSGKAEGHQAKRRRVEDLTASGGQQDLTLLQQQVAQAQMPQQQHKLAQAHI
EEHTALLQPQLFSPTLLPHLPLLQQNLLKQFLPSAAESLQQRNLLSPLQFSPDSLFSLQQ
QMIQSFYLSGGLQLNPNMNFSQITSALSLQTISALSSQTNGLKHPSPKLVTTSIQFPAQP
PKCETQAETADSDSPLHQTEKESNPSSSPEGDGEMQESKKRDGAEKALRVLLERYGWELA
LQSNQSRQRQQNRETGGCPEEEKQCGECGKQFSDSLILKSHQEFVHQQMITPVVLETFSR
QYDCLYPLTPFPVADNDNTVVARLTPATAPVLAPLPPAPVSYSRDEMGLGRDQSLIQAQS
LSQASAIGPDQAVPTTPASVPVTLSTDQAPVNSFCPAQASPTPSPPPPSSQTQPLPEQQQ
DTMTSTTTSAPSPTIIPQSNLSMHFPLSQLPLPPLPLPSLPTLPFPIDLSLLPLGLMQPI
ALQSMLQYQSLLSSGHQPPLSLFTNAHSTHKPSLPSYTNTHCAPSPSLPPYTNTHCAPSP
SLPPYTNTHCAPSPSLPPYTNTHCAPSPSLPPYTNTHCAPSPSLPPYTNTHSAPSPSLTS
YTNTHCAPSPSLTSYTNTHCAPSPALPFLKRRLEEGTAVTPMRDVMDGEREEEGEREGDE
QRRDRRQRTTISSEQLEVLYQRYSLNSNPTRSVLEGITRDTGLKKRVVQVWFQNTRARQR
KGQLQSLGRGGGLCLGDNHRRCPFCRALFNAQNALDAHVRAHHCSQTDRAAYGSFHQMGP
ADDSSFSHNH
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaggaaacggtggagagagagaaccttgcaccagcatttagtagcaaagaca
gaggaggagaaacagagggaagaggctatctcaaaccaaagccaaaccaactccaaatgt
agtctattacctcgacggagccagcacagctctgcctcctgcactgttatggccagtggc
acactgaacaataacaccctcatcacagagatgagagatacaagaggagtgcagggcagt
agtccgaattttcctctgagctttattaaaccccagaagtcagccctgcttgagtacacc
agcacacctgttacggatgataggaggacagacaccactcacacttcccttattgccaat
ggagacaccgccaaagttccaaaaccaaacaacaacccaaaagagacagatggaaaaaga
gaggtagatggagagatagaaggagataaggatagagagagagatgagaaattaaagacc
gtttctaaatacctccacccctctccgtcctcacctggctcactgaacagtcacatggcc
ttgatgcactcctggaactcctgcaagatgctcaaatgccccaaatgtaactggcactac
aagtcccagcagacactgcatgcccacctcagagaaaaacaccctgcgtctgggggcttg
tgtgtgtgtgggggctcgggggagaagtgtgtgtgtggagtgtcaaggggtgtgtgtgtg
tactgtagcacggggaaggcccaccctcgtctgtcccggggagagagttatgtttgtgag
tacaaaccctaccgctgtggtgtgtgtgattacacaacctcctctaaaggaaacctcagc
atacacatgcagtcagacaaacacctcagcaacgtacaggtagcaggacacacacaccct
gcgcacggcactcacacacactccgcacacaatggtggctacgctgtcagagacacggca
ggtgaacagggctacggacgcacacaccccacagtcacacagccccctgcacacacaaca
ccctaccccagccagcccccttcccacggtaagaggtggcggtgtgaggtgtgtgattat
gagaccagcattgcccggaatctgcgcatacacaccaccagcgagaaacacatgcataac
gtgctgcgcctgaaacaaacacccaacgtgttgcagagaagctactacctggcccactgc
aggagtctgcctcctcaactcacactgctacacagcataggtggcgaacagtctttggat
atgcatcaactatcagcagaggagccagtcgccccggattcaaccctgaccccctccccc
tctcctcctccctcctcaccatccccttctccatcctcctctccccctcctccactgtct
ctctccccctcttctcctctttcctgtggtgtgttccagtgcctggtgtgttccagtttc
tcctctgacagtctggagtctcttaggtctcacctgagcgccccctgctccctgccccag
tctgagtggcgctctctggtggctggaggctgctactgcaggctgtgtggctacagcacc
cccctcagggctaacttcaccctgcactgccagacagacagacacagggcccagtaccag
ctggcttcccacctctgggaggccggggacagggaggaatttgtgaagttggttgctaca
ggcaacccagtccagctgaagtgtaacttgtgtgacttccagaccaccagcttggagaaa
ctgaaaatacacagcatcaacccccaacaccaggccagcctcagartctccaggttctta
cagcagtatgacagtgcagtagatggagggtcctggttgttccattgtgtcctgtgtaac
tactcctcctgttctaaactccacctattgagacatacccactcccctggtcatcagaag
agggagcttcactacttgcagttagtgagagggaggagcctggaggaaggggaggggcta
gcggctactttcaccattaggaagtgtcccagtcctgagacaggtggaagcattgcggag
ggggagaggagagattccctttctccagccaagcgatcgttctctgggctggaggagaca
cagagccccctctctcccaaacgccccagaacagaccagcgcactactcaccaacaggct
actgccaagtgcccactgtgccaggacacactggtatacacacacctgagacgccacctc
atactcatacacagtgtggtccaggactgtgtggacaagctcatgagtatggtggcagtg
gagctgcctgagattctgcagaaagagacactgcagatggagtcccactcaaatataaag
gaatctcaaacaaacgattgcaacacaaacagctcttacacgaaggaatccctcacaaac
gagcctcaaacaaatgactaccatacaaaaaaagaaaaagtaatcacagccaaagatgtc
cctgctcttctgactcctccctgtaaggaccagcacccagcagaggacaacacctctcac
ctccttgagtcccccagctctcccccttccccacccactctttcctctctctcccccagc
aacctcccttcatccactttacccccgtctcctcccagtgatgcccctcccccctctgat
tgtcatggttacaggtttcgctgcggcaggtgcagtctagcggtccgaaggcagaagaag
ctgcagatgcactggcagtaccacgccatgagggcggcaacagagtgccacctctgcccc
agacgctgccgcagccaagaggccctgcagagacacctgctcaacacacacctacaggac
ctacacctacagggtacacaccctgaccagagtggagcacacatccaacaaccaatcagc
ctggagggggaggaagaggagggggagagtatgagtgaagaagagacggataaggaggaa
gatgatgaggagggagagcagggaaagggagatgaaggagaggaggatgaaaaggatgac
ccagatgaggaggagaggcccagtccaggggttagtaatagtgacaagggttcagggcag
caggaggaggagacagggtcagaacccagccccctcatcaagggctcgaacccgactctg
gagcggttcctggacccggctcggccctacaagtgttccttctgctgtgagtccttcact
cagagaaccatcctgctggtccactataactctgtgtctcacctccaccgagccaaagcc
agacgggccctgcatgactccagccccagtcatgctgacaccccccagggcctggaacca
agcccctaccgctgcagcctggcccctgaccccaggccctaccgctgcagaatgtgtagg
gtggcctacagccagagctccaccctggacatccacctccgttctgtactgcaccagaca
cgagcccgtggagctcggacccagctatcactgaacccccacacccgccaaaccctagtt
ccagccttggttcagaccacttcctccagccgttcaccagggggaggagaggtatctacc
aggggaaccaccccaacagccaccagatcagccccttcctccccaagtccctgttcctcc
ctcagtgaagcccagctgagtgtgggtgtctctgggaaggctgagggccaccaggctaag
aggcggagagtagaggacctgacagcatctggaggacagcaggacctaacgttactccaa
cagcaggtagcccaggcccagatgccacaacagcaacataagttagcccaggcccatata
gaggaacacacagccctcctccagccccagctctttagtccaacactgctcccgcacctc
cccttactgcagcagaacctcttaaagcagttcctcccttcagcagcagagagtctccaa
cagaggaacctcctctctcccctccagttctccccagacagcctgttttctctacagcag
cagatgatccagtccttctacctctctggaggtctgcagctcaaccctaacatgaacttt
agtcagatcacctcagccctctccctccagaccatctctgccctctcctctcagacaaat
gggcttaaacatccctctccaaagctggtgacaactagcatccagtttccagcccagccc
ccgaaatgtgagactcaggctgagacagctgacagtgactccccccttcaccagacggag
aaagagtcaaacccatcctcctctcctgagggagatggagagatgcaggagagcaagaag
agggatggagcagagaaggctctcagagttctgctggagagatatggctgggagctggcc
ctgcaatccaatcagagcagacagagacaacagaacagagagacgggtggatgcccggag
gaggagaagcagtgtggagaatgtgggaagcagttctctgactctctgatcctgaagagc
catcaggagtttgttcaccagcaaatgatcactccggtagtgttggagacgttctccaga
cagtatgactgcctctaccccctcacacccttccctgtggcagacaatgataatactgtt
gttgcacgtctaaccccagccacagcacctgtacttgcacccttacccccagcaccagtc
tcttattcaagggatgaaatgggtttggggagggaccagtctcttatccaagcccaatcc
ctctcccaagcctcagccataggtccagaccaagctgtacccaccacaccagcatctgta
cctgtaaccctgtccacagaccaagccccagttaattccttctgcccagcccaagcctca
ccaacaccctctcctcctccaccctcttcccaaacacaaccacttccagagcagcagcag
gacactatgacatcgacaaccacctctgccccctctccaactatcataccccagtccaat
ctctccatgcatttccccttatcccaactccccctgccccctcttcctttaccaagcctc
cccactcttcccttccccatagacctctctctcctcccccttggtctaatgcagcccata
gcactccagtctatgcttcagtaccagtccctgttatcatcgggccaccaaccaccccta
tccctattcaccaacgctcactccacccacaaaccatctctaccctcatacactaacaca
cactgtgctcctagcccatctctacccccatacactaacacacactgtgctcctagccca
tctctacccccatacactaacacacactgtgctcctagcccatctctacccccatacact
aacacacactgtgctcctagcccatctctacccccatacactaacacacactgtgctcct
agcccatctctacccccatacactaacacacacagtgctcctagcccatctctaacctca
tacactaacacacactgtgctcctagcccatctctaacctcatacactaacacacactgt
gctcctagcccagccctgccctttctgaagcgtaggctggaggaagggacagcggtaacg
cctatgagggatgtgatggacggtgagagagaggaagagggagagagagagggtgatgag
cagaggagggataggcgccagaggaccaccatcagttcggagcagctagaggttctgtac
cagcgctacagtctgaactccaacccaacccgctctgtactggagggcatcaccagggac
acaggcctgaagaaacgtgtagtgcaggtatggttccagaacaccagggctcgtcagagg
aagggccagctccagagcctggggagaggaggaggtctgtgtctcggtgacaaccacagg
cgctgtccgttctgcagggctctcttcaacgctcagaacgccctggacgcccatgtcagg
gcccaccactgttcacagactgacagagctgcctatggctcatttcatcagatgggtcct
gcagatgactccagcttctctcacaaccattga
DBGET
integrated database retrieval system
