Salvelinus sp. IW2-2015 (Arctic char): 111961302
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Entry
111961302 CDS
T05762
Symbol
apc
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04310
Wnt signaling pathway
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111961302 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111961302 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111961302 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111961302 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111961302 (apc)
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111961302 (apc)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
111961302 (apc)
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
111961302 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_rep
APC_u5
APC_u9
APC_N_CC
SAMP
Arm
APC_u14
APC_15aa
Suppressor_APC
APC_u13
APC_u15
Sec7-like_HUS
DUF5399
Motif
Other DBs
NCBI-GeneID:
111961302
NCBI-ProteinID:
XP_023839231
LinkDB
All DBs
Position
LG4q.1:29:complement(6077241..6133398)
Genome browser
AA seq
2790 aa
AA seq
DB search
MAAASYDQLLKQVEILKMENSNLRQELEDNSNHLTKLETEASNMKEVLKHLQGSVEEETT
DSSEQINLLERLKKISLDPNSYPGVTLRPKLPSMQGSGSGRSGDSSPSPSQMGSFPRRGV
SNGGRDSAGYLEELEKERSLLMAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENQFSLQT
DMTRRQLEYEARQIRAAMEEQLGTCQDMEKRAQVRVARIQQIEKDMLKLRQHLQSQSAEP
ESKHDQAGQSEGPQASGDSGGPSAGCSQGSSSRLDHDSASEISLGVGSYSVPRRLTSHLG
TKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSVL
LGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRVYCETCWEWQESHER
GVDQDKNPMPSPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGLT
SDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLR
NLSWRADVNSKKTLREVGSVRALMECALEVQKESTLKSVLSALWNLSAHCTENKADICAV
EGALAFLVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHL
KSHSLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL
MANRPAKYKDANIMSPGSSLPSLHVRKQKALIEELDSQHLSETFDNIDNLSPKASHRGKP
SRHKQNVYSDYDGVSRSDGFSPNSVPVRPPYVNTPVLSSPSPRENQRGNIDSVRAERDRS
QDRDRARGAPGGFHPDHDSKRMQMPATTAAQIALVMEEVKSIHLLTGLDDRSPESPNQDP
HRTTAAHGHSNVYPYTKPDHSGRPCPMPKLEYRASNDSLNSVNSTDGYGKRGQMKPSVDS
YSEDDEGKCCVYRKYPADLAHKIHNANHMEDDDGEVDTPINYSLKYSDEQLNSGRQSPSQ
NERWARPKHMEEEMKQTDQRSVRSQSPGYPMYTEGNSEGEEKLKYKPRFVQTEMPQGFRS
RNANQQDQSNAGPTQGINKKMNNQTMCQSVDDYSDDKPTNYSERYSEEEQDEQPTNYSMK
YTEEHHAEQPIDYSLKYSDSSSQKSMFSHSKSSSTQSSVKDNLSQDGSTSSVSSIKNAGR
QMQLHPSSAQMRSGPTRPGQKNTICKPPTVNQETLQTYCVEDTPICFSRGSSLSSLSSEE
DEMEGCKRNVNATSNYPTLPISEKESTGGHTREQRRTESQLSVQYVRMKPPRNIQVHGDG
SRHHKAVEFSSGAKSPSKSGAQTPKSPPEQYVQETPLMFSRCTSVSSLDSFESHSIASSI
QSELCSGMPSGIISPSDLPDSPGQTMPPSRSKTPPPPPENQHPPPMKHKKVPPPPPPRAD
MAPRHAAVHAAVQKVQVLPDNDALLHFATESTPEGFSCASSLSALSLDEPYIQKDELKIM
PPVHEDDQGIEAEHENDDTTEPPSQGKRETEKDILDDSDDDDIEILEACINSAMPTKSSR
KLKKQSPSNTTSRIPPPTARKPSQLPVYKLHPSQTRGQQKTVNFAHGEDMPRIYCVEGTP
INFSTATSLSDLTIDSPPNELANAESRAPPRAEISSSQRRDTIPEGKCTEEKDAGVTSSS
TQAAGTENEGDDILAECISSAMPKGKIHKSFRVQKMYDQPLHPSASPVSLVQQEVEKKPT
SPVKPMPQSSEYRARMIKKPQPPFNFSSYPDKNKETKMQQTKMASRDFTDKPQNAERPRP
GFAFDSPQHYTPIEGTPYCFSRNDSLSSLDFEDEEPNLAKEKAELRKDKDQRKASTKNCG
KPSLRANRGNLPQTAPTKPQQQKEAVFPQASKENMGPVPDEKQKFSIEDTPMCFSRNSSL
SSLSDIDQENNNKDLQPKEEEEEEEEDVTQVEAPTRPQASGYAPKAFHVEDTPVCFSRNS
SLSSLSIDSEDDLLQECISSAMPKKKKQTARNKEGNDQGDAIEERSMDGILAEEPELILD
LTDTYSPVSEQALSPDSESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSILSLKSG
ISLGSPFHLPLNSEDNKSASDKGRPRILKPGEKSTLEAKKKEKEEEAAKALKGGKKVYKS
JITGKPRASTETPASLQQRQTAPTVPISRGRTMIHVPGVRSSSPSTSPVQKKPPARGPAS
VSKIPPTQGQSSSNSNRSIKPPAKSDPSPARDQPGSQSGSSKASSRSGSRDSTPSRPAQQ
SLTTRPMQSPGRSSVSPGRNGLGPSNKLSQLPRTASPSTSSTKSSGSGRMSYTSPGRQMG
QQTPPKQTGLTRSTSGIPRSESASKSLNQCGVTGTSKKQDLSRMTSTKSSGSESDRSEKP
ALVRQSTFIKEAPSPTLKRKLEESASFESLSPSSTSQSQTPVSSPSLPDMSLTLPYQGSQ
GSNWKKSPQSQNSSENEDGQPQRGGKHDISRSHSESPSRLPNLNRTGTWKREKSKHSSSL
PRVGTWKRTGSSSSILSASSESSEKGKSEDERQPLSPAQRSPHGKDGNPLKGTWRKMKDS
EISQSEGHDSSSIDSNTMAMGHQMSPAVSKTEDVWVRIEDCPINSPRSVKSPTANTPPVI
DSVLVKMPSVDLLSSETHPKQSKNESVNARRLGPETNLNLFRSSESLDKKGPDLKPAQSI
IPEAHELPVAERTPFSSSNSSKHSSPSGAVAARVSPFNYTPSPRKSSADSATPPRPSQIP
TPVSVTNSAKKRESKGESAGESGSYIVTSV
NT seq
8373 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcatcttatgatcagctgctgaagcaagtggagatactgaagatggagaac
tccaaccttcgacaagagcttgaggacaactcaaaccacttgaccaaactggagaccgaa
gcctccaatatgaaggaggtgctgaaacacctacagggaagcgttgaagaagagactacc
gattcatccgaacaaatcaatctccttgaaagactgaagaaaattagcctggatcctaac
agttacccaggggtgacgctaagacctaagctgccctccatgcagggctcaggctctggg
cggtcaggggacagcagccccagtcctagccaaatgggctccttccccaggagaggggtg
tccaatgggggccgagacagtgctggctacctggaagagytggagaaggagaggtcttta
ctgatggcggagctggagaaagaggagaaggagaaagactggtattacgcacagctgcag
aacctcaccaagaggatcgacagcctgccactgactgagaatcaattctccctgcagact
gatatgacccgtaggcaactggagtatgaggcgaggcaaatcagagccgccatggaggaa
cagctgggtacctgccaggatatggagaagagggcacaggtgagggtggctcgcattcag
cagattgagaaggacatgctgaagctccgacagcacttacagtcccagtctgcagaacca
gagagcaagcacgaccaggctggccagagtgaaggaccccaggcttcaggggacagtggt
gggccaagtgctgggtgttctcagggttcaagcagtcgcctggatcacgattctgccagt
gaaataagtttgggtgtgggtagttactctgtgccccgccgactgaccagtcacctgggc
accaaggtggagatggtatattcccttctttcaatgctggggacccacgataaagatgac
atgtctcgcactctgcttgccatgtccagctctcaggacagctgcatcgccatgcgtcag
tctggctgccttcccttactcatccagctcctccacggcaacgacaaggactcagtgctg
ctggggaactcacggggaagcaaggaggcccgggcgagagccagtgccgcccttcataac
attatccactcccagcctgatgataagaggggtcgcagggagatcagagtgctgcacctc
ctggagcagatcagggtctactgtgagacctgctgggagtggcaggagagccatgagaga
ggagtggaccaggacaagaaccccatgccctctcccgtggagcatcagatctgcccagcg
gtgtgtgttcttatgaagctgtcctttgacgaagagcacaggcacgctatgaatgagctc
gggggcttgcaggctataggggagctgctccaagtggactgtgaaatctatggcctcacc
agcgaccactacagcgtcactctgaggagatacgctggcatggccctcaccaacctcacc
tttggggatgttgccaataaggcaacactgtgttccatgaagggatgcatgagggccatg
gtggctcagctgaagtctgagagtgaggatctacagcaggtgattgccagtgtgttgagg
aacctgtcctggcgtgcagatgtgaacagtaagaagaccctccgcgaggtgggcagcgtc
agggctctgatggagtgtgcattggaggtacagaaggagtctactctgaagagtgtcctc
agtgccctgtggaacctgtcagctcactgcactgaaaacaaagctgatatctgtgctgta
gagggtgctttggccttcctggttagcactctgacataccgaagccaaaccaacaccctc
gccatcattgaaagtggaggaggcatcttgcgcaacgtatctagtctcattgctacaaat
gaagatcacaggcaaatcctgagagagaacaactgtcttcagacactcctgcagcacctg
aagtctcacagcctgactattgtgagcaacgcgtgcggcactctgtggaacctctctgcc
cgcaacgcaaaggaccaggaggccttgtgggacatgggtgctgtgagcatgctgaagaac
ctaatccactccaagcacaagatgatcgccatgggcagcgctgcagcactgaggaacctc
atggcaaacaggcccgccaaatacaaggacgccaacatcatgtcgcctggatccagcctg
ccctctcttcacgtcaggaaacagaaagccttgatcgaggaactggactctcagcacctc
tctgagacatttgacaacattgacaatttaagccccaaggcgtcccacaggggtaaacca
agcaggcacaagcagaatgtctacagtgattacgatggtgtttctagatcggacgggttt
agccccaacagtgtgcctgtgcgccccccttacgtgaacacaccagttctgtcaagcccg
tcacccagagagaaccaaaggggaaacatagacagtgttagggctgagagggatcgaagc
caggacagagacagagcgaggggtgcacccgggggtttccacccagatcatgactcgaag
agaatgcagatgcctgccacaacagctgctcagatcgccttggtgatggaggaggtgaaa
agcattcacttgctgactggtctggatgaccggtcaccagagagccctaatcaagaccct
caccgtaccactgcagcacatggtcattcaaatgtatacccctacactaagcccgatcac
tcgggcagaccttgtccaatgcccaagttagaatacagggcgtcaaacgacagtctcaac
agtgtcaacagcactgacggctatggaaaaagaggccagatgaagccatctgtggactct
tactctgaggatgatgaggggaagtgttgtgtctatagaaaatatcctgcagacctcgct
cacaagatccacaatgcaaaccacatggaagatgatgatggagaagttgacacacccatc
aactacagcctgaagtattctgacgagcagctgaactctggtcggcaaagtccaagccaa
aatgagagatgggcgaggcctaagcacatggaggaggagatgaaacagacagatcagagg
tctgtgcgatctcaaagcccaggctaccccatgtacacggagggcaacagtgagggcgag
gaaaaactcaagtacaagcccaggttcgtgcaaacagaaatgccacagggattcagatca
aggaacgccaatcaacaagatcaaagcaatgctggccccactcaaggaattaacaaaaag
atgaacaaccagactatgtgccagtctgtggatgattacagtgatgacaaaccaaccaat
tatagtgagcgatactcagaggaagaacaagatgagcagccgaccaattacagcatgaag
tacaccgaggaacatcacgcagaacaacccattgattacagtctgaaatactcagactcc
tcctcccaaaaatccatgtttagtcattcaaagtcatcctccactcagagctcagtgaaa
gacaatctgagccaagatggttccacatcatccgtgtcatccataaagaatgcaggaaga
caaatgcagctacatccctcctcggctcaaatgagatcagggccaactcggccaggccag
aagaacacaatatgcaaaccccctaccgtcaatcaagagacactacagacgtactgtgtt
gaggacacacccatctgtttctcaaggggtagctctctgtcatccttgtcctcagaggag
gacgaaatggagggctgcaagaggaatgtaaatgctaccagtaactacccaactcttccc
atctctgagaaagagtcgactggcggtcacacacgagaacaacgcagaaccgagagccag
ttgtctgtgcagtatgtccgaatgaagcctccaaggaatattcaagttcatggagatgga
tccagacatcacaaagctgttgagttttcatctggagccaaatccccatccaaaagtggc
gcccagacccccaaaagccccccagaacagtatgtgcaggagacacccctcatgttcagc
agatgcacatctgtaagctctctcgacagctttgagagccattccatcgctagctctata
cagagtgaattgtgtagcggtatgcccagtggaatcattagtccaagcgatctgcccgac
agccctggtcagaccatgcctccgagtcgtagcaaaacaccaccaccacccccagaaaat
caacatccacccccaatgaaacacaaaaaggtgcctcctccgccgcctccgagggcggat
atggctccaaggcatgctgctgtacacgctgctgtccagaaagtccaggtgcttccggat
aatgacgccctcctacactttgcgacagagagtaccccagaaggattctcttgcgcatcc
agcctcagtgctttaagcttagatgaaccttacattcagaaagatgagctcaagatcatg
cctcctgttcatgaagacgaccagggaattgaggctgagcatgagaatgatgacactaca
gaacccccaagccaagggaagcgtgagacggaaaaagacattttggatgattcagatgat
gacgatatagaaatactggaggcttgcataaactcagccatgccaacaaagtcatcaaga
aaactcaaaaagcaatccccttccaacactacttctagaataccaccacctactgcccgt
aaaccaagccaacttcctgtttacaaattacatccttcacaaaccagaggacaacagaag
actgtgaactttgcccatggagaggacatgcctaggatttactgtgtagagggaacccct
atcaatttctcaaccgccacatctctcagcgacctaaccattgattcaccccctaatgag
ctggccaatgctgaaagccgtgctcctcctcgtgcagaaatatcatccagtcaaagaagg
gacactattccagaaggtaaatgtacagaggaaaaagatgcaggtgttacttcctcctcc
acacaagctgccgggacagaaaatgaaggggatgatattttagcagagtgcatcagttca
gccatgccaaaaggtaaaatccacaaatcctttagagtacagaaaatgtacgatcaacca
ctgcacccgtcagcttctcctgttagcctagtccagcaggaggttgaaaagaagcccact
tcccctgttaaaccaatgccacagagtagtgagtatagagctaggatgattaagaaaccc
cagcctccgttcaacttttcttcataycctgataaaaacaaagaaaccaaaatgcaacag
acaaaaatggcatccagagatttcacagataagccacaaaatgcggagaggccacgtcca
gggtttgcttttgactcgccacagcattacacaccaatagagggtacaccctattgcttc
tcacgcaatgattcactgagttcattggactttgaggatgaggaacctaacctcgccaag
gaaaaggcagaactcagaaaagacaaagaccagaggaaagcttcaacaaaaaactgtgga
aagccatccttaagggcaaacaggggaaatctaccacagactgctccaacaaaacctcag
caacagaaggaggcagtatttccacaagcatccaaagaaaacatggggccagtgccagat
gagaagcagaagttttccattgaagacacgccgatgtgtttctctagaaactcatctctc
agctctttaagtgacattgaccaagagaacaacaacaaagacctccagccaaaagaagaa
gaagaagaagaggaggaggatgtaactcaggtggaagctcctacaagaccccaagcctct
ggttacgcaccaaaagcctttcatgttgaagatacccctgtgtgtttttcaagaaacagt
tcactcagctcactaagcattgactcagaagatgaccttctacaagagtgcatcagttca
gccatgccaaaaaagaagaaacagacagcgagaaataaagaggggaatgaccaaggagat
gccattgaggagagaagtatggacggcattttagctgaggagccagaactcatattagat
ctcactgatacatatagtccagtttctgaacaagccttatcgccagactctgagtccttt
gattggaaggccatccaagagggtgccaattccatcgtcagcagtttgcaccaggcagct
gctagcctctctagacaaggctcatctgactctgactcaatcctctccctcaaatctgga
atatcccttgggtctccctttcatttacccttaaattcagaggataataaatctgcatcy
gacaaaggacgcccacggatattaaagcctggtgaaaagagcactttagaagcaaaaaag
aaagaaaaggaagaggaggcagcaaaagctcttaaagggggcaagaaagtctacaaaagt
mtcataacaggaaaaccacgtgccagcactgagaccccagcttcattacagcagaggcag
acggcccctactgttccaatctctcgtggtaggacaatgatccatgtccctggtgttaga
agcagttctccaagcactagcccagtccaaaagaagcctccagcccgcggtccagcctca
gtctcaaaaattccccctacccaagggcagagctccagtaattcaaacagaagcattaaa
ccacctgctaaatctgaccctagtcccgccagggatcagcctggatctcaatcgggatca
agtaaagcttcatcacgatctggatccagagactccacaccatccaggccagctcagcag
tccttgaccaccagacccatgcagtcacctggtcgctcctctgtgtcacctggaagaaat
ggtctcggcccttcaaacaaattatcccaactgcctcgcactgcttctccaagcacatcg
tcaaccaagtcttctggttctggcaggatgtcctacacctcccctggaagacagatgggt
cagcaaacgccacccaagcagactggcttgactagaagcactagcggaatccctaggagt
gaatctgcctcaaagagcctaaatcagtgtggagttactggcacatctaagaagcaagac
ttgtccaggatgacatccacaaagtcaagtggaagtgagtcagaccggtcggagaaacct
gccctagttcgccagtcaacgttcatcaaagaggcccctagtccaacactgaagaggaaa
ttggaagagtctgcctcgttcgagtctctgtccccctcctctaccagccagtctcaaacg
cctgtgtcaagcccgtctttgccagatatgtcgttgactctgccctatcaaggaagtcag
ggaagcaactggaaaaagtcccctcagagtcaaaactcttcagaaaatgaggatgggcaa
cctcaaaggggagggaaacacgacatctccagatcccattcagaaagcccctccagactc
cctaatcttaacaggacagggacatggaagagggagaaaagcaaacactcctcctctctt
ccaagggttggcacctggaagagaactggcagctcctcttccatcctctctgcctcctct
gagtcaagtgaaaagggcaaaagtgaggatgaacgacagccactgagtccagcccaaagg
tccccacacggcaaagatggaaaccctttaaaaggaacatggaggaagatgaaggacagt
gaaatctctcagtcagaaggccacgattcttcctccatagactctaacaccatggccatg
gggcaccaaatgagccctgcagtgtccaagactgaggatgtgtgggtgaggattgaggac
tgtcccattaacagtccgaggtctgtaaaatctccaacagcaaacacacctccagtaatc
gacagtgttctagtcaaaatgccctctgttgatctcttgtcaagtgaaacccatcccaaa
cagtccaaaaatgaaagtgtaaatgctcgtaggctaggtccagagactaatttaaacttg
tttaggagcagtgagagtcttgataagaaagggccagacctcaagcctgctcagagcatc
atcccagaggcccatgaactgcctgttgctgaacgcaccccttttagctcctccaactct
agcaaacacagctcacctagtggtgctgtggctgccagggtcagccctttcaattacact
cctagccccaggaagagcagtgctgacagtgccacaccaccacgaccctcacagataccc
acgcctgtcagcgtcaccaacagtgcaaaaaagagagaatctaaaggagaaagtgctgga
gaaagtgggtcctacattgtaacctcagtttaa
DBGET
integrated database retrieval system
