Salvelinus sp. IW2-2015 (Arctic char): 111962591
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Entry
111962591 CDS
T05762
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1 isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111962591
Membrane trafficking [BR:
salp04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
111962591
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111962591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
111962591
NCBI-ProteinID:
XP_023841533
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Position
LG4q.1:29:79452265..79630782
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AA seq
1110 aa
AA seq
DB search
MSNTKFKKDKEIIADYESQVKEIRAQLVDQQKCLDQQTEMRVQLLQDLQDFFRKKSEIEM
EYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDIY
LNNVIMRFMQISEDSTRLLKKSKEITFQLQEDLMKVLNELYTVMKTYHMYHTESISAESK
LKEAEKQEEKQIGRAEPVFSYRLEDKHQRRSSVKKIEKMKEKRQAKYSENKLKSIKARNE
YLLTLEATNSSVFKYYIHDLSDLIDCCDLGYHASLNRALRTYLSAEYNLETSRHEGLDII
ENAVDSLDPRSDRQRFMELYPTAFCPPIKFQFQPHMGDEVCQIAMQPPVSGELMLRFQQL
QSRLATLNIENEEIKKTSEATLTTIQDMVTIEDYDVSECFHHSRSTESVKSTVSETYLSK
PSIAKRRANQQETEQFYFMKFREFLEGSNLISKLQAKHDLLKRTLGEGHQGDYMTTRPPN
VPPKPHSGTNRRARPRSVFNVKLFNGNLESFVKDSGQAIPRVVESCVRFINLYGLQHQGI
FRVSGSQMEINDIKNSFERGNDPLTDEENNHDINSVAGVLKLYFRGLEKSLLPKERFNDL
LSCVRIENLYERSLYIRKILLTAVPRSILIVMRYLFAFLNHLSQYSDENMMDPYNLAICF
GPTLMPTPNIEDQVLCQAHVNEIIKTIIIHHETIFPDTKELDGPVYEKCMAGEDYCESPY
SEHGAIEEVDNEGGTETHTSEDEGEPIEAIAKFDYVGRSARELCFKKGASLLLYQRASDD
WWEGRHNGIDGLVPHQYIVVQDMDDNFSDTLSQKADSEASSGHGAEDKCSGKDMSSPTDT
RITDAYIGSRHKKRTEPPSRRPPARPNDVNCMVHPSQQTQGGQAHTPEMGSPVLGHSFSP
RDLLRSRNHGQLPMDSPEHRRRTGHGSLTNISRHESLKKMESPPIRRSTSSGQYTAVFQD
PHPRGGGKPLDPETIAQDIEETMNTALNELRELERQSSAKHAPDVVLDTLEQRQSTGGPT
PASSSESLSPLHNILLRAQTGEARGPPMCRSTSSSSDTMSTFKPVVVPRMGVQLKPPALR
PKPLVLPKTGPAHPPPVHPPQDPLDKSCTM
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatacaaagttcaaaaaggataaagaaatcattgctgattacgagagtcaagtt
aaagagatccgtgcccagctggtggatcagcagaaatgcctggaccagcagacagagatg
agggtgcagctcctccaggacctgcaggacttcttcaggaagaagtcagagattgagatg
gagtactccaggaacctggagaaactggcagagaggttcatggctaagactcggagcacc
aaggaccaccagcagtacaagaaggaccagaacctgctgtccccggttaactgctggtac
ctgttgctgaaccaggtgaggagggagagcaaggaccacgccaccctcagtgacatctac
ctgaacaacgtcatcatgcgcttcatgcagatcagcgaggactccacacgcctgctcaag
aagagtaaggagataacgtttcagcttcaggaagacttgatgaaggtcctcaacgagctc
tacactgtgatgaagacttaccacatgtaccacacggagagcattagtgcagagagcaag
ctgaaggaggcggagaagcaggaggagaagcagatcggccgggccgagcctgtcttcagc
taccgcctggaagacaagcaccagagacgcagctccgtcaagaagattgagaagatgaag
gaaaagcgccaggccaagtactcggagaacaagctgaagtcaatcaaagcacggaacgag
tacctgctgacactggaggcaacaaattcctccgtcttcaagtactacatccacgacttg
tctgacttaattgactgctgtgatctgggctaccacgccagcctgaaccgtgccctgcgg
acctacctatcggctgagtacaacctggagacaagtcgccacgagggcctagacatcatc
gagaacgccgtggacagtctggaccctcgcagcgaccgccagcgcttcatggagttgtac
cccacagccttctgcccgcccatcaagttccagttccagccccacatgggcgatgaggtg
tgccagattgcgatgcagccgccggtgagcggagagctgatgttgaggttccagcagcta
cagtcccgcctggccactctgaacatcgagaacgaggagatcaagaagacgtcagaggcc
accctgacgaccatccaggacatggtgaccatcgaggactatgacgtctccgagtgtttc
caccacagccgctccaccgagtcggtgaagtccaccgtgtcggagacctacctcagcaag
cccagtatcgccaaacggagggccaaccagcaggagacagagcagttctacttcatgaaa
ttccgggagtttctggagggcagcaatctcatctccaaactgcaggccaagcacgaccta
ctgaagaggactctgggagaaggtcaccaaggggactatatgaccacaaggcctcccaat
gtgccgcccaaacctcacagtggcacaaataggagggctaggccccgctcggtctttaac
gttaagttgtttaatggcaatctggagtcctttgtcaaggactctggacaagctattccc
cgtgtggtggagagctgtgttcgattcatcaatctctatggccttcaacatcaagggata
ttccgtgtgtccgggtctcagatggaaatcaatgacatcaagaactcattcgagagaggt
aacgacccattgacagatgaagagaataaccacgacatcaactcggttgccggggttctt
aaactctacttccggggcctggagaaatccctcttgcccaaggaaagatttaatgacctc
ctctcctgcgtcagaatagagaacctgtatgaaaggtccctgtacatccgtaagattctc
ctgaccgccgtgcccagatccatcctcatcgtgatgcgctacctttttgcctttctcaat
cacctgtcccagtacagcgatgagaacatgatggacccctataacctggccatctgcttc
ggccccaccctcatgcccacacccaacatcgaggaccaggtgttgtgccaggcacacgtc
aacgagatcatcaagaccatcatcatccaccacgaaaccatcttccccgacaccaaggag
ctggacgggcccgtctacgagaaatgcatggccggggaagactactgtgagagtccctac
agtgagcatggggccatagaggaggtggacaatgagggaggcactgagacgcataccagc
gaggacgagggcgagcccatcgaagcaattgccaagtttgactacgtggggcgttctgcc
cgagagctgtgcttcaagaagggcgcctccctgctgctgtaccagcgggcatcggacgac
tggtgggagggacggcacaacggaattgacggcctggtacctcaccagtacatcgtggtg
caggacatggatgataatttctcagacacacttagtcagaaggctgacagtgaggccagc
agcggccatggagctgaggacaagtgttcaggaaaagacatgagctctcctactgacacc
aggatcactgacgcctacattggcagcaggcataagaagaggacggagcccccctcccgc
cgccccccggcgcgcccgaatgatgtcaactgtatggtgcacccctcccagcagacccaa
gggggccaggctcacacgcctgagatgggctccccggttctgggtcactccttcagcccc
cgggacctgctgcggagccgcaaccacggacagcttcccatggacagccctgagcaccgg
cgccgaacaggccacggcagcctgaccaacatcagccgccacgagtcactgaaaaagatg
gagagcccgcccattcgacgctccacaagctcgggccagtacacggccgtgttccaggac
ccccacccgcgcggtggtggcaagcccctggatccggagaccattgcacaggacatagag
gagacgatgaacacggcgctgaacgagctgcgtgagctggagaggcagagttcggccaag
cacgctcccgacgtggtgctggataccctggagcagaggcagtcgaccgggggtcccacc
ccagccagctccagcgagtccctcagccccctccacaacatccttctgagggctcagacc
ggcgaggccagggggcccccgatgtgccgcagcaccagctcttccagcgacaccatgagc
accttcaagccggtagtggtaccccgtatgggggtgcagcttaagccgcctgccctgagg
cccaagcccctggtgctgcccaagacgggcccggctcaccctccccctgtacaccctccc
caagaccccctagacaagtcgtgcaccatgtga
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