Salvelinus sp. IW2-2015 (Arctic char): 111965239
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Entry
111965239 CDS
T05762
Name
(RefSeq) uncharacterized protein LOC111965239
KO
K06454
T-cell surface glycoprotein CD4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03250
Viral life cycle - HIV-1
salp03260
Virion - Human immunodeficiency virus
salp04060
Cytokine-cytokine receptor interaction
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111965239
03260 Virion - Human immunodeficiency virus
111965239
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111965239
04514 Cell adhesion molecules
111965239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111965239
CD molecules [BR:
salp04090
]
Proteins
111965239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Izumo-Ig
Sp38
Motif
Other DBs
NCBI-GeneID:
111965239
NCBI-ProteinID:
XP_023845071
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Position
LG6.1:17019982..17042417
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AA seq
397 aa
AA seq
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MKYVSGFLSIIIALFITSTGAEDVMVYGQVGGTVTLPRSKWGSEKVLVQWYLGMDTKSLI
SRNSHGRETTDPLWKDRLSLSKTDFSLIINNIRLEDFXSFRCELKDFRPTPFTSVTTFRL
SHVSVQPVSPLLAGKNLNLKCDIGEIFEGTQRXWLSPQKQDLSKDTRAQIRFDSSLTVMK
VTGQDHGEWTCVVTYQGREAYANTHVTVIDLSPAHPQPIYTSVSSLSLLHLPCFFSVPPP
LSWSESQEKSIQGGRWTFTPSPAAGSLTGVVQTLVNLSMGPPLAWVVNQKRGLDVSALQR
KNLNLSLSKKGVTEGDRGEYTCTVEFQRDDTLKRSTCVEVLQGKSSFAAVLKKCPSPSFL
PSLLPNLVATFLPPSFNYPLAYFPLLSAYKVRSDRSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacgtttctggattcctttcaatcattattgcattgttcatcacttcaacaggg
gctgaagatgtgatggtgtatggtcaggtgggagggacggtcactctccccagatcgaag
tggggttcagaaaaggtgttggtacaatggtaccttgggatggacacaaaatctttgata
tcccgcaactcccatggtcgagagacgacagatccactgtggaaagacaggctgtctctg
tcaaagacggacttctccctgatcatcaacaacatcagactggaggacttcmaatccttc
agatgtgaactgaaagatttcaggccaacaccatttacctcagtcaccacattcagactg
tcccatgtgagtgtacagccagtctctcccctgttggctgggaagaatcttaatctgaag
tgtgacataggggaaatatttgaggggacacagagaaratggcttagtccccagaaacag
gacctgagcaaggacacgcgtgcmcagatcagatttgacagcagcctgacagtaatgaag
gtcactggccaagaccatggagagtggacctgtgtggtgacataccagggcagggaagcc
tatgccaacacccatgttactgtaatagacctctcccccgctcatccacagcctatctac
acctctgtctcctccctctctcttctccatctgccatgtttcttttccgttcctcctcct
ctatcctggtcagagagccaggaaaagagcatccagggaggccgctggacctttacccca
agcccagcggcaggctccctcactggggttgtccagaccctcgtcaacctctccatgggg
cctccattagcctgggtggtcaatcagaagagagggctggatgtctcagccctgcagagg
aaaaatctaaacctctccctgtcaaagaaaggggtgacggagggggacaggggcgagtac
acctgcactgtggaattccagagggacgacacactgaagagaagtacgtgtgtggaggtg
ctacagggtaagtcaagctttgcggcagtcctgaaaaaatgtccttctccttccttccta
ccttctttacttcctaacttggttgctaccttccttcctccctcctttaattatcccctt
gcttatttcccccttctttctgcctacaaagtgaggagtgacagatcactttga
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