Salvelinus sp. IW2-2015 (Arctic char): 111969870
Help
Entry
111969870 CDS
T05762
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111969870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111969870
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
111969870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
111969870
NCBI-ProteinID:
XP_023851981
LinkDB
All DBs
Position
LG11:complement(15201355..15212067)
Genome browser
AA seq
448 aa
AA seq
DB search
MSSRVLLRQQLMREQAQEQERREAQQQDSVAQLRATDSTPAIYVTLPPMAARPPPAQVPV
EVLKVQTHLENPTKYHIQQSQRQQVKEYLSTTLGNKVAPQILGVSPLTLSSSAPEMAPTA
LSAPNSPMALLNLGSNKEEIDGVIDDIISLESSFNDDFMTLIDLGLQLPSTLPGNLLDIY
HSPGMAAPTLTVSNSCPADLTNIKREYSDTKVLVKERQKKDNHNLIERRRRFNINDRITE
LGAIIPKSSDPETRWNKGTILKASVDYIRKLQKEQQRAKEVEMRQKKLEHANHSLMLRIQ
ELEMQAQLHGLSSLMSPGLSSDPSLRQQQHLQQGDHKLGPSSGEACSQTFLSLGAAAMAQ
PVLTSSPPSSDSPVVVTISSPLDLGSVSFTELDDPSNAGMYLDVGLGDIIMDEGYTLSPE
RVDPLFFVSPGASKTSSRRSSFSMEEDL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtgtgctgcttcggcagcagctgatgcgggaacaagcccaggaacaagag
agacgggaggcccagcagcaggactctgtggctcagctcagggcaactgactccacccct
gccatctatgtcactctgcccccaatggctgctcgccctccacccgcacaggtgcccgtg
gaggtgttgaaggtgcagacccatctggagaaccccaccaagtatcacatccagcagtct
cagaggcagcaggtgaaggagtatctctccaccaccctcggcaataaggtggcacctcaa
atcctaggtgtatctcccttgacactgtctagctctgcccctgagatggctcccacagcc
ctcagtgctccaaacagcccaatggctttactcaacctgggatccaacaaagaggagata
gatggrgtaattgacgacatcatcagccttgaatcaagtttcaatgatgacttcatgacg
ttaattgacttgggtctacagctgcctagtacactccctgggaacctcctggatatatac
catagtcctggaatggcagcacctaccctcactgtcagcaactcctgccctgcggatctg
accaatattaaaagggaatactctgataccaaagtgctggtgaaagagagacagaagaag
gacaaccataacctcattgagaggaggcggaggtttaacatcaatgaccgcataacggag
ctgggggccataatacccaagtcaagtgacccggagacgcgctggaataagggcaccatt
ctgaaggcctcggtggactacatcaggaagctgcagaaggagcagcagagagccaaggag
gtagagatgcgtcagaagaagctygaacatgctaaccacagcttgatgctgcgcatccag
gagttggagatgcaggctcagctccatggcctctccagcctgatgtcccctggcctgagt
tcagacccctccctccgtcagcagcagcaccttcagcagggagaccataaactggggccc
agctctggagaggcctgctcccaaacctttctcagcctgggggcagcagccatggcgcag
cctgtccttacctcctccccaccttcctctgactcccctgttgttgtgaccataagcagc
cccctggacctgggcagtgtcagcttcaccgagctggatgacccctccaatgctgggatg
tacctagacgtggggttaggggacatcatcatggacgaggggtacacactgtccccagag
agggtggacccactgtttttcgtgtcaccaggtgcctcaaagaccagcagtcgtaggagc
agcttcagtatggaggaggacttgtag
DBGET
integrated database retrieval system
