Salvelinus sp. IW2-2015 (Arctic char): 111970558
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Entry
111970558 CDS
T05762
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111970558
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111970558
04261 Adrenergic signaling in cardiomyocytes
111970558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111970558
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111970558
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
Cache_3-Cache_2
dCache_2
Motif
Other DBs
NCBI-GeneID:
111970558
NCBI-ProteinID:
XP_023853146
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Position
LG11:complement(10714984..10960935)
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AA seq
1123 aa
AA seq
DB search
MAICAQSYGIFCMFSIQTILIISVSSPATGSLRFPQHYTMMHWAGRIEKELEKTLQLVTG
AQQMKGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTMYPW
QDGIKESDMEYYDSKAESDYTEDEDGEENLMENPYSVKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDTRREDSSLRWQVFGSSTGVTRYYPATPWRAPNK
IDLYDVRRRPCVGGDGAGWLTCLCSVLGVQKGFRRVRPRLCLKLRFRATSVLRDSSGTEV
RVTVQVERYGSNALVVVLCCVCRSGSVSGLTLKLMKSSVIQMLDTLSDDDYVNVARFNEK
ADAVVPCFKTLVQATMRNKKIFKESIMNMQAKGTTDYKSGFQFAFEQLLNDTGAPRAGCN
KMIMMFTDGGEDRAQDIFEKYNWPNKEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGL
VITGTMPVFNLTADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLL
LHPNLQPKIINFREPVTLDFLDAELEDSKKEEIRRDMIDGKSGQRKITTLIKSVDERYID
EAMRTYTWTPVEGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFI
APREYCNELELSNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWK
TKDLNTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYR
TLNDELLNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPT
SDNRQVQQTCGPTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPY
LMHALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSL
FQQLLCGMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLI
HAKRLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDY
NLAENTSDCGRGHSFRPSFQTLLTIQLILLYPIASTHILPLLL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtattttctgtatgttctcaatccaaactatcctc
atcattagcgtctcttcgcctgcaacggggagcctccgcttcccccagcactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactctgcaactggtcactgga
gcccagcagatgaaagggatttacaatgagaagaagagccagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaaa
aggagagccctggagagactagccagagaggcggagcagctgcagacaatgtatccctgg
caggacgggatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatgaagatggggaagagaacctgatggagaacccctactccgtgaagctggag
tttgtggacgatcccaactttaaaaacaaagtgaactactcctacagtgccgtccagatc
cctacagacatctataagggctccccagtcatcctgaatgagctgaactggactcaggct
ctggagagggtgtttattgatacccgccgggaggacagctccctgcgctggcaggtgttc
ggcagctcgacgggggtcacaagatactacccagccactccttggagagcacccaataag
attgacctgtatgacgtgcgcagacgaccatgtgtcggcggcgacggtgctggttggctg
acctgcttgtgttctgtcctgggggttcagaaaggtttcaggagagtgaggccccggttg
tgtttgaagctgcgattcagggccacgtcggtgctgagggacagcagtggaacagaggtc
agggtcactgtgcaggttgaacggtatggctctaatgctctggtggttgtgctctgttgt
gtctgtaggagtgggagtgtcagtggactcactctgaagctgatgaagtcctctgtgata
cagatgctagacactctgtcagatgatgactatgtgaatgtagccaggtttaacgagaag
gcagatgccgtggtcccctgctttaagaccttggtccaggccaccatgagaaacaagaag
atcttcaaggagtccatcatgaacatgcaagccaaaggaaccactgactacaagtctggc
ttccagttcgccttcgaacagctactcaatgataccggcgccccgagggcgggctgcaat
aagatgataatgatgtttacagatggaggagaggatcgtgcccaggacatttttgagaag
tacaactggcccaacaaagagtacctggatgtgctgggtcggcccatggtgctggctggg
cccaaggccaagctggtccaatggaccaacgtctaccaggatgctctgggtctgggtctg
gttatcactgggaccatgccggtcttcaacctcaccgctgatgcaaactctcagactcag
ctcgtccttggtgtcatgggagtggatgttgcgatcaacgaaattaagaggaagacacca
acatataggcttggagccaatggatacacgtatgcaatcgacaaaaatggctatttgctc
ctgcaccccaacttgcaacctaagatcattaacttcagagagcctgtcactctggacttc
ctggatgctgagctggaggacagtaagaaggaggagatccgtcgtgacatgattgatgga
aaatcagggcaaaggaaaatcacgaccctcattaagtcagttgatgagaggtacattgat
gaggctatgcggacatacacctggacaccggtggaaggcacagattacagtctcgggctg
gtactgcccacgtacagtgagaaccacatcaaggctaacctgagtgaccagatcctgcag
gtgcagtattttgaatctctgctgccaaacagttttgagtctgaaggacatgtattcata
gctcccagggaatactgcaatgagctggagctctccaacaacaacactgacttcctgctc
aacttcatcgctctcatggagaaggtgactcctgactccaaacaatgtgacaacctgctc
cttcacaacctcatcctggacactggcatcatcagacagctggtggagaaggtgtggaag
accaaagacctcaacacatatggctttttggccgtgtttgctgccacagatggagggatt
acaagagtttttcccaacaaggctgctgagacctgggaggaggaccctgagccttttaac
gccagctattaccgccgtagtctggacaacaagggctacatcttcagagcgccttatcgt
accttgaatgatgagctgctgaacccagagaacgacaccatagggatcctggtcagcact
gcagtggagatcacagtgggagggaagacaatcaaacctgcagtggttggagtaaagctg
gatcttgaggcctgggtggacaaattcaagatcctggctagcaaccaaacaagtccaaca
agtgacaaccgccaagtccaacaaacgtgtggaccaaccagtggctgtgagatggactgt
gacgccaacagcgaagacctgctgtgttacctggtggatgatggtggtttcctgatcatg
tccaatcagaaggactactggaacaagattggcatgttcttcagtgaggtggacccctac
ctgatgcatgctctctacaacaactccttttacaaccggaagcagtcctttgactaccag
tctgtgtgtgacccggtgccgagcagcaacaccggggctgcaccaagaggagtctttgtg
cccaccattgcagactttgtgaacctggcctggtggacatcagcagctgcctggtcccta
tttcagcagctgctctgtggaatggcttaccacagttggtttgtcacagatgaggtggag
gcagaggggatggactccagagagaccagctgtgtgacgatacagactcagttctacttc
accaacatcaacagttcctatgacatcctgcaggactgtggcaactgctccaggctgatc
catgccaagaggttaaacaacaccaacctgctgtttgtggtagcagagaagatgccctgc
aacacctgcgaggtggagaaactgtcccaggcggagacagagttcaaggacgataaccca
tcatgtgaggatatgagtgcagcgaggtatcgaaaagggccaactgtgtgctacgactac
aatctcgctgagaacacatctgactgcgggcgcggccactccttccgcccctccttccag
accctgctcacgattcagctcatcctgctctatccaatcgccagcacccatattctgccc
ctcctactttaa
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