Salvelinus sp. IW2-2015 (Arctic char): 111971059
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Entry
111971059 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111971059
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111971059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
GPHH
PKD_channel
IQ
ATP-synt_B
Zip
SieB
Motif
Other DBs
NCBI-GeneID:
111971059
NCBI-ProteinID:
XP_023853630
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All DBs
Position
LG12:complement(1621028..1669068)
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AA seq
2054 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRITEEEARKPRVDRCSDSNDDNEPKPNSDLEAGK
SLPFIYGDVPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIXRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSEVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTTPDDRLNRTLGTPD
LNGTDFNGTDFNITSSVNWTEYINNESNYYYLPNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYNYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNHATIEEAAQKEEEFQAMLEQLKRQQEEALVAAAAATESHGEYSER
GGPSTEASSGTSKLSSKSAKERMNHQKKRKERGEHKKFHKSESEDSTKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDVVSDNDFADDEQSTFEDTD
SRRGSLFVPCRIERRSSTVSQTSLAPQRVLLPSNGKMHCTVDCNGVVSLVGVTSVPTSPV
GLLLPERTTTDSEMRLKKRRSRQASMSYLDEPDRARARAMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTK
EFNHVLSVGNLVFTGIFTAEMGFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYNECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVAIRQVI
QSLVLGGGATKGVKGGSLEGGKTLDELHSSINGKGGNCNSKHMLVEITKDPSGVYLKEGN
GRPGGGLGVGLGDSTENYPQEECNYMSFIHNPSLTVSVPIAVCESDFETTITEDFSSDST
SEEMSMGSKELVQGMVPPPVPFIAAPPNSIGVGSKVLGNGTGGPRSRRPREANKLSSRID
KSTSWSRLRVVSLKTSSLRTSSRCVLRFQCCQVNVEEGKWKMWWTLRKTCFIIVEHNWFE
TLIIFMILLSSGXLAFEDIYIEQRKTIKIVLEYADKVFTYIFILEMLLKWVAYGFKKYFT
NAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALRPLRALSRFEGMRVVVNALL
GAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCVNTTNDETFPIEVVNNKSDCLALAN
DSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPTNAXQGCVFDFVTKQAFDIVIMILICLNMVTMMVEEDDQTPERENILHWINFVFIVL
LTGECTLKMISLRHYYFTIGWNVFDFVVVILSIVGMFLSELIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIED
MFNFETFGNSMLCLFQITTSAGWDGLLAPILNKKEPDCDSQMEHPGTLYRGNCGNPPVAM
FFFVSYIIICFLIVVNMYXAVILENFSVATEESAEPLSEDDFEMFXEVWERFDPDATQFV
EYXKLSDFADALDPPLRMAKPNHIQLIKMDLPMVSGERIHCLDILFAFTKRVLGEGEGLD
LLRGQMEERFMASNPSKVSXEPITSTLRRKQEDMSALVIQRSFRRYLARLALKKAAELYK
KQPKGSVMYELEDKEVLVIGQSADNSTLTEKTDMTPSTASLPSYNSATNLEKDQYEKEKR
EKENRDKDLREQNK
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcatcaccgaggaggaggcccggaaaccccgcgttgaccgc
tgtagcgacagcaatgacgacaacgagcccaagcccaacagcgacctggaggcggggaag
tccctccccttcatctacggggacgtcccacaaggctttgtctccacccctctggaggac
ctggaccccttctactccaatcagaagacatttatagtattgaatcgcggcaaggcaata
ntccgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctcc
atggcatatgtgacagagtttgtggacctgggtaatgtctcggccctcagaaccttcagg
gttctccgagccctcaaaactatatcagtcatcccaggactaaagaccatcgtcggcgct
ctgatccagtcggtcaagaagctctccgargtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctgcagctcttcatgggcaacctgaggcagaagtgtatccgc
aacctcgtcaatgacacaacccccgacgaccgcctgaacagaactctgggaactccagac
ttaaatggaaccgatttcaacggaaccgatttcaacatcactagctccgtgaactggact
gagtacatcaacaatgagagtaattactattacctccccaaccgcagggacgccctcctc
tgtgggaatggcagtggagccgggttgtgcccagagggattcacgtgcatcaaggcgggc
aggaacccagactacaactacacaagcttcgactcatttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
ggaaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggtggccatggcctacgatgagcagaaccaygccacsatagag
gaggcagcccagaaggaggaggagttccaggctatgctggagcagctcaagagacagcag
gaggaggcattggttgccgcggcagcagccacagagagccacggagagtacagcgagaga
ggggggccctccacagaagcctcctcagggacctccaaactcagctccaagagcgccaag
gagagaatgaaccatcagaagaagagaaaagagaggggcgagcacaagaagttccacaag
tccgagtcggaggacagtaccaagaggttaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccgagctagcctgtttagcttccgaggccgcgcccgc
gatgtggtctccgataacgacttcgccgatgacgagcaaagcacgttcgaggacaccgac
agccgccgcggctccctgttcgtgccttgccgtatcgagcgccgctccagcacggtcagt
cagactagcctggcccctcagcgcgtcctgctgccctccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagtgacctcggtgcccacctcgcctgta
ggactgctcctgcctgagaggacaaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatgtcctacctagatgagccagacagagccagagccagagctatg
agtgtggccagtattctcaccaacaccatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagtttcaaggggatcgtcaacacagtggtgatggaccccttcgtggacctggccatc
acrgtctgtatcgtcctcaacaccctcttcatggccatggaacattatcccatgaccaag
gagttcaatcatgtcctctctgtcgggaacttggtgtttacaggcatcttcacggctgag
atgggtttcaagctaatcgctctggacccctactactactttcaacagggatggaacata
tttgacggcatcatcgtcagtctgagtctgatggaactcggcctggccaatgtagagggc
ctgtctgtgctccggtctttccgattgttgagggtgttcaagctggccaagtcttggccc
accctgaacatgctgatcaagatcatcggtaactcggtgggagcgctgggtaatttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaygagtgtgtgtgtaagatcgcagacaactgccagctgccgcgctggcacatg
catgacttcttccactcgttcctcatcgtgttccgggtgctgtgtggggagtggatcgag
accatgtgggactgcatggaggtggctggtcagagcatgtgcctcatcgtcttcctgatg
gtcatggttatagggaacctggtggtcctgaatctgttcctggccttgctgctcagctcc
ttcagcgccgacaacctggcggccacggacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcatccagaggggcgtggcctgggtcaaggtggccatccgccaggttatc
cagagcctggtcctcgggggcggagccaccaaaggggtcaagggggggtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaaggggggcaactgcaactca
aaacacatgttggtcgagatcactaaagatccgagtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggctaggagacagtacggagaattacccacag
gaggagtgcaactacatgtcgttcatccacaaccccagcctgacggtgagcgtgcccatc
gcggtgtgcgagtcggactttgagaccactatcacggaggacttcagcagcgactcgacc
tccgaggaaatgtcgatgggcagcaaagagttggtgcagggaatggtcccccctccggtc
cccttcatagcagcccctcccaactccatcggtgttggatccaaggtgctgggtaatgga
acgggcggaccccgatctagacgtccgcgggaggccaacaagttatccagccggatagac
aagtccaccagctggtccaggttgagagtggtgtccctaaagaccagctccctacgaacg
tcctctcgctgtgtgctcaggttccagtgttgccaggtgaacgttgaggagggcaagtgg
aagatgtggtggaccttgaggaagacgtgtttcatcatcgtggaacacaactggttcgag
accttaatcattttcatgatcctgctcagcagtggcyctctggcgtttgaagacatttac
atagaacagcggaagaccattaaaattgtgctggagtacgcagacaaagtcttcacctat
atcttcatcctggagatgctgctgaagtgggtggcctatggattcaagaagtacttcacc
aacgcctggtgttggctggacttcctcattgttgatgtgtctctggtgagcttggtagcc
aatgcgttaggctactctgagctgagtgccattaaatccctacgaacactgcgggcctta
agacccctgagggccttgtcacggttcgagggcatgagggtggtggtgaacgccctcctg
ggtgccattccgtccatcatgaacgtgctgctggtgtgcctcatcttctggctcatcttc
agcatcatgggtgtcaacctgttcgcagggaagtactactactgcgtcaacaccaccaac
gacgagacctttcccatcgaggtggtcaacaacaagagcgactgtctggccctggccaat
gacagcgcccgatggaagaatgtcaagatcaactttgataatgtrggggccgggtacttg
gccttgttgcaagtggcaacgtttaaaggttggatggacatcatgtacgcagctgtggac
tctcgtaatgtggaacttcagccccaatatgaacagaacctctacatgtatctgtacttt
gtcatcttcatcatctttggctccttcttcactctcaacctcttcattggtgtcatcatt
gacaacttcaaccaacagaagaaaaagtttggaggtcaggacatcttcatgacagaggaa
cagaagaaatactacaatgccatgaagaagcttggctccaagaaaccccagaagcctatt
cccaggccaacgaatgcattscaaggctgtgtgtttgacttcgtaacgaagcaggctttt
gacattgtcatcatgatcctcatctgcctcaacatggtcactatgatggtggaagaggac
gaccagacaccagagagggaaaatatcctccactggattaactttgtctttatagtgctc
ttractggggagtgtacgctcaaaatgatatccctccgccattactacttcaccattggc
tggaacgtgtttgactttgtcgttgtcatcctttcaatcgtaggtatgtttttatcagaa
ttgattgagaagtactttgtttccccaacgttattccgagtcatccgacttgccagaatc
ggccgcatcctkcgtctcatcaagggcgcraagggcatccggacgcttttgttcgccttg
atgatgtcacttcctgccctgtttaacattggcctcctgctcttcctggtcatgttcatc
tacgccatcttcggcatgtccaacttcgcctacgtcaagcacgaggcgggaatcgargac
atgttcaacttcgagacgttcggcaacagcatgctctgcctgttccagatcaccacgtcg
gcgggctgggacggcctcctggcgcccattctcaacaagaaggagcccgactgtgacagc
cagatggagcacccyggcaccttgtaccggggaaactgcggcaacccgccagtggccatg
ttcttcttcgtcagctacatcatcatctgtttcctcatcgtggtcaacatgtacatrgcr
gtcatcctsgagaacttcagcgtggccaccgaggagtcggccgagccgctgagcgaggac
gactttgagatgttctargaggtgtgggagcgcttcgacccggacgccacmcagttcgtg
gagtacsacaagctgtcggactttgcagacgcgttggacccgccgctgcgaatggccaag
cccaaccacatccagctgatcaaaatggatctgcccatggtcagcggggagcgcatccac
tgccttgacatcctgtttgccttcaccaagcgtgtcctgggagagggrgaaggcttggac
ctcctccggggccagatggaggagcgcttcatggcctccaacccctccaaagtctcctar
gaacccatcaccagtaccctgcggcgcaagcaggaagacatgtctgccttggtgatccag
aggtcattcaggcgctacctggcccgactcgctctgaagaaagcagcagagctctacaag
aagcagcctaaaggcagtgtgatgtatgagctggaggacaaggaggtgctggtgatagga
cagtccgcggacaactccaccctcactgagaaaacggacatgacgccctccaccgcctcg
ctgccttcgtacaacagtgccacaaatttggaaaaggaccaatatgagaaggaaaagagg
gagaaagagaacagagacaaagatctgagagagcaaaataaataa
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