Salvelinus sp. IW2-2015 (Arctic char): 111971808
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Entry
111971808 CDS
T05762
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111971808
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111971808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111971808
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
111971808
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Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
111971808
NCBI-ProteinID:
XP_023854386
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Position
LG13:6710611..6736999
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AA seq
554 aa
AA seq
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MKDKLFEFHKVGVEEADTLSLYCDVVGGNPTPEVPVVVRLRSTGPSPSASSGMVPVNGRV
SINTAYGTTAWSVLGITRLVWRILGVRMSGHLKKPRGEDAGEYMCVYTFDQAPSANATIE
IKGLIGLQLINGKNESAHINDAVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFK
RVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIW
PGGETEKPRGFQMSTRLKIVTIHQEPFVYVKPTEQDGTCKEEKTLNGVADIKKVICTGPN
ETIPGRPIVPQCCYGFCIDLLIKLAGTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMM
GELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTL
WLLVGLSVHVVAVMLYLLDRXSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEG
APRSFSARILGMVWAGFAMIIVASYTANLAAFLVDSKHTSPLLLQSMTSLYYSKHCTSPS
TTPSMTLTLYYSKR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaagctctttgagttccacaaagtgggtgtggaagaggcggacactttgagt
ttgtactgtgacgtggtcggcggtaacccgaccccagaggttccagtggtggtacgcttg
agatcaaccggtccgagtccttccgccagctctgggatggtgcccgtaaacggtcgcgtg
tccatcaacacggcgtacggcaccacggcgtggagcgttctgggcatcacgcgtctcgtc
tggaggattttgggcgtacgaatgtcgggccacctgaagaagccccgaggagaggatgca
ggggagtacatgtgtgtctacaccttcgatcaggccccgtctgctaacgccaccatcgag
attaaaggtctcatcggcctccagctcatcaacggcaagaatgagtcggcccacatcaac
gacgcagtggcagtggtggctcagtccatccaggagctctttgagaaggagaacatcacg
gagccgccgagaggctgtgtgggaaacaccaacatctggaagaccgggcccctcttcaaa
agggttctgatgtcatcaaagtacccagagggcctcactggacgtgtggagttcaatgac
gatggcgacaggaagtacgctcactacagcattctcaactaccagaagagtcgactcatt
caagtcgggatttacaatggaacacaggtggtgatgaataatcagaggaagatcatctgg
ccggggggagagacagagaaaccgcggggctttcagatgtccacaagactaaagatagtg
accatacaccaggagccctttgtgtatgtgaagcccactgagcaggatggaacctgcaag
gaggaaaaaacattaaatggagtggcagatattaaaaaggtgatctgcactggaccaaat
gagaccatcccaggacgtccaattgtacctcaatgttgttatggattctgtatcgatcta
cttatcaagttggccggaaccatgaactttacctatgaggtgcacctggtggctgatggg
aaatttggaacacaggagcgggtgaacaacagcaacaagaaagagtggaatggcatgatg
ggagagctcctggggggtctggcagatatgatcgttgccccgctgacgataaacaacgaa
cgagcccagtacatcgaattctccaaaccttttaagtaccaaggcctaaccatcctcgtt
aaaaaggaaatccctcgcagtacactggactcgttcatgcagccgtttcagagcacactg
tggctgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccgg
nctagcccgtttgggaggtttaaagtaaacagtgaagaagaagaagaagacgccctcacc
ttgtcgtcagccatgtggttctcctggggagttttgcttaactccggtattggggaaggc
gcgccacgcagcttctcagcgagaatcttgggcatggtgtgggccggctttgccatgatc
atagtggcatcgtatactgccaacctggctgccttcctggtagactccaagcatacctcc
cctctactactccaaagcatgacctcgctctactactccaagcattgtacctcaccatct
actactccaagcatgaccctcaccctctactactccaagcgatga
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