Salvelinus sp. IW2-2015 (Arctic char): 111972669
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Entry
111972669 CDS
T05762
Symbol
esr1
Name
(RefSeq) LOW QUALITY PROTEIN: estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972669 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111972669 (esr1)
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111972669 (esr1)
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3A. Estrogen receptor
111972669 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
111972669
NCBI-ProteinID:
XP_023855462
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Position
LG14:8868671..8894418
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AA seq
618 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESPTISPPKLSPQQPTTPNSNMYPEETRGGGGAAAF
NYLDGGYDYTAPAQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPSHHGFPSQSYYLETSSTPLYRSSVVTNQLSTSEEKLCIASDRQQSYSAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPLQDGGR
NSSSSLNGGGGWRGPRITMPPEQVLFLLQGXEPPALXSRQKVARPYTEVTMMTLLTSMAD
KELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILD
RSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCYYSVESLHN
SPAVQSMLDNITDALIHHISQSGASVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSIKCK
NKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDIHIRSP
GSGVLQYGSPSSDQMPIP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccccaccatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcggaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctgcccaaggcccggcccccctctat
tactccaccaccccccaggatgcccacggacccccttcggatggcagcatgcagtccctg
ggcagcagtcccactggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaagccaccatggtttccccagccagtcatactacctggagacctcttcc
acacccttatacaggtcgagtgtggtaaccaatcagctatcaacgtcagaggagaagctc
tgcatcgcctccgataggcagcagtcgtacagtgcggcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcgactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaggcatgccgcctcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgtggtgggcgggttctcaggaaggataagcggtattgtggccctgctggtgac
agagagaaaccctacggagacctggagcacaggacagcgccccttcaggacgggggtagg
aacagcagcagcagccttaatggtggtggaggatggcgtgggcccagaatcaccatgcct
cctgaacaggtgctgtttctgctgcaggggncagagcctccggccctgntttctcgtcag
aaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggccgac
aaagagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctgtct
ctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcggactc
atatggagatccatccactgccctgggaaactcatcttcgcccaggacctcatactggac
aggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggccact
gtgtctcgcttccgcatgctcaaactgaagcctgaggagtttgtgtgcctcaaagccatc
atcttgctcaactctggtgccttctccttctgttattactctgtggagtccctccacaac
agcccggcggtgcaaagcatgttggacaacatcactgacgccctcatccaccacatcagc
caatcgggagcctcggtgcagcagcagtccagacggcaggcccagctcctgctcctgctc
tcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgtaag
aacaaagtgcctctgtacgacctgctcctggagatgctggacggtcaccggctccaatcc
ccaggcaaagtggcccaagctggggaacagaccgagggcccctctaccaccactaccacc
tccacaggctccagcatagggccgatgcgaggcagccaggatatccacatcagaagccct
ggttcgggggtactccagtatggctcccccagctcagaccagatgcccattccgtga
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