Salvelinus sp. IW2-2015 (Arctic char): 111973725
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Entry
111973725 CDS
T05762
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111973725 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973725 (prdm6)
03036 Chromosome and associated proteins [BR:
salp03036
]
111973725 (prdm6)
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
111973725 (prdm6)
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111973725 (prdm6)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111973725 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
111973725
NCBI-ProteinID:
XP_023856880
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All DBs
Position
LG15:complement(45082098..45136621)
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AA seq
563 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPTYMQHWQQLFPQSQLKNGGITQLQPPDRVAVPVESLRQRPNLI
SSTSSSSALTPSSTSSSTPSVSSLAGLSQLSVPQIALFGQTLSSDIVSSDNTNLQAKELC
ISSSFKNDKGSRFKLTSDELDYYLYGQQRMEIIPLNNHTGDHNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSAAPAVPPPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTW
IGPFAGVPLLLDKLQSGGVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCG
EQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVME
AMSRQETLQPLSKTGKGFSVALLRSMVFPHSPCSRSFSLMDKGGHTDSGFNQMSSKNQRV
LASPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQP
SELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLS
RHQRMPNECKPISGESSESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacccggtgaccctagcggatctgctttcttgaaagtggacccgacgtacatg
caacactggcagcagctcttccctcaaagccagttgaagaatggaggcattacgcagctg
cagccgccggacagggtagctgttccggtggaaagtctccgtcagcggccgaacctgatc
tcctccacatcatcatcgtcggctttaacaccttcctccacatcttcatcgactccatcc
gtttcatcattggcaggtttatctcaactatctgtgccacaaattgcactttttggacaa
actctctcttctgacattgtctcgtcagacaacaccaacctccaagcgaaagaactttgt
atatcctccagctttaagaatgacaaagggtccagatttaaactgacctccgatgagtta
gactactacctctacggacagcagagaatggagattatcccattgaacaatcacaccgga
gaccacaacaatcggtgtgacatgtgtgcagataaccgtaacggagagtgccccatgcac
gggcccctgcactcgctgcggcgcttggtggggacaagcagtgcagcgccggccgtgccg
cccccagatgtccctgactggctgcgggacctgccccgtgaggtgtgcctctgcaccagc
actgtgcccggccttggctacggcatctgtgccgcccagcgtatcccacagggcacctgg
atcggcccctttgcgggagtccccctcctcctggataagttgcagtcaggaggggtgcgc
aacacaaggcacttatgggagatctatgaccaggaagggacgttacagcactttattgac
ggcaatgagccgagcaagtcgagctggatgagatacattcgctgtgcacggcactgtggc
gagcaaaacatgatggtggtccagtacagatcatgtatattctaccgggcatgtatggac
attccaagaggaacagagctccttgtctggtacaatgacagctacacctccttctttggc
atccctctacagtgcattgcgcaggatgaaaacttgaatgtaccaaccacagtcatggag
gccatgagcagacaagagacgctgcagccgctcagtaaaacgggcaaaggtttctcggtg
gccctgctgcgctccatggtcttcccccactcgccctgctccagaagcttctccctgatg
gacaagggtggccacacggactccggcttcaaccagatgagctctaagaaccagcgagtc
ctagccagccccacctccaccagccagctgagcaccgagttcagtgactggcacctctgg
aagtgcggccagtgctttaagacgttcacgcaacgcatcctgctccagatgcatgtgtgc
acacagaacccagacagaccttaccagtgtggacactgctcccagtccttctcccagccg
tcggagctgcgcaaccatgtcgtcactcactccagcgaccggcccttcaagtgtggctac
tgtggccgggcatttgcaggagccaccactctcaacaaccacatccggacacacactggg
gagaagccattcaagtgcgagaggtgcgacaggagcttcacacaggccacccagctcagc
agacaccagcggatgcccaacgagtgcaagcccatcagcggcgagagcagcgaatcaatc
gaggtggattag
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integrated database retrieval system
