Salvelinus sp. IW2-2015 (Arctic char): 111974846
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Entry
111974846 CDS
T05762
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111974846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
EGF_CA
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
111974846
NCBI-ProteinID:
XP_023858648
LinkDB
All DBs
Position
LG15:14128690..14178279
Genome browser
AA seq
2523 aa
AA seq
DB search
MHHFFVKLTFLLSLIALTRGLRCSMSTESCLNLGRCEATADGNGECKCRDGYVGNRCQHQ
DPCTYSSCKNGGSCRMVPRGNSVEFTCFCRPGFTDRLCLTPIDNACLSLPCRNGGTCDLV
NLKEYKCRCPPGWSGKQCQQADPCASNPCANGGQCTPFESHYICSCTPFFYGQTCKQDVN
ECAQNPSPCKNGGVCVNEVGTYRCQCPQEYTGKHCDTRYLPCNPSPCHNGATCVQKGDTT
YECSCVPGFSGQNCDANIDDCPRHECQNGGTCVDGVNTYNCQCKPEFTGQFCTEDVDECQ
LMPNACQNGGTCHNIYGAYQCVCVNGWTGDDCGENIDDCANAACYQGAVCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPLGYFGAACDQDVDECSLGG
NPCEHGGKCLNTKGSFQCKCQPGFSGARCEHDINECLSNPCQNEATCLDQIGGFHCICMP
GYEGLFCQINTDECANNPCLNNGKCIDKINTFHCQCPTGFAGNLCQIDIDECSSTPCKNG
AKCTDGPNKYTCECTEGYTGQHCETDINECFSDPCHYGTCKDGLASFTCYCRLGYTGRLC
ETNINECLSQPCRNGGICQDRENSYICTCPKGTTGINCEVNLDDCKSKPCDYGTCLDKIN
GYECACEPGYSGTMCNINIDECDLNPCHNGGTCIDGINSFTCLCPEGYHDTTCLFQVNEC
LSNPCIHGHCQDKVNGYNCLCDNGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
VGFTGPSCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSTKPCKN
AGVCQESEDYENFSCVCPEGWQGQTCEVDINECVKNPCLNGATCENTKGNYRCGCKAGYA
GRNCETNIDDCKPNPCSNGGFCRDEVDNFVCTCLPGFRGTKCEEDINECDSNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCLDGINTYTCLCPPGFTGSYCQH
DINECDSRPCLNGGTCQDSYGTYKCICLQGYTGLNCQNLVRWCDSSPCKNGGTCWQTGTT
YSCECQTGWTGLYCDVPSVSCEVAAKQRGVEVVALCRNSGQCLDAGNTHYCHCQAGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYSCKCVAGYVGTNCSNEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPVTNEPKCFNKGKCVDRVGGYHCICPAGYV
GERCEGDVNECLSNPCDLRGTHNCVQLTNNYRCDCRTGYTGERCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGYTGSTCEYDAHSCGNLHCRNGGTCVSGHKNPKCLCTSSFTG
PECEYPTDNPCNTNPCYNGGTCEYSSEAPYYHCVCPTNFNGLLCHILDYSFLGGFGRDIT
PPPEVEVSCEIPQCEETKGNKFCDMLCNNHACGWDGGDCSLNFNDPWKNCTSSLQCWRYF
NDGKCDEQCNNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGRLVIVVHIMPDQLRNNSLGFLRELSRVIHTNVVFQQDAKGQTMIYPYY
GSEQELKKHNMKRSVGWTEIPDTVLSSMKNSMYTIANGSRRRRRELDPMQIKGSIVYLEI
DNRQCVQQSTECFQSATDVAAFLGALASSGNLNVPYIIEAVHSEVDPQPPSELYPIYAVL
AGLALLAFVGVGMVASRKRRREHGQLWLPEGFKTSEPNKKKRREPVGEDSVGLKPLKNSL
DISLMDNKQNEWGEEEPSDAKRFRQFEEQVMLDLDDQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGAK
LHSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGKTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRD
IAQERMHHDIVRLMDEYNLVRSAPVHSHGHGGSMGTTLSPPLCSPNGYLGSMKVQGKKAR
KPSAKGIGCKDGKDMKNKKKASQDGKGGSVLDSSAVLSPVDSLESPHGYISDVASPPMMT
SPFQQSPSMSLNHLQGMSDPHMGVNHMGMPNKQELAHMQFDPLPPRLTHLPVSGSNGSGG
MNGQCDWLSRMHASMGQPSQFNPMRVGPVGGQGGLHQGGGQQGMILHNGLPTTSLSQMMS
YQGLQNTRLASQPHLLQQAQQQMQQQMQHQQNLQQQLQQQQQQQSIQLQHQNSNTGTSGH
SISQNFISSELSGSELQQGTGNQGSMPIHTILPQETQIMSQNLPSTQYLTPPSQHSYSGP
MDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSSMQSQIGHIPD
QFK
NT seq
7572 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttctttgtgaaactaactttcctgttgtcgcttattgctctaacacgaggc
ctaagatgctctatgtccaccgagtcgtgtttgaacctggggaggtgtgaggccacggct
gatggaaatggagagtgcaaatgtcgggatggatacgtggggaacaggtgtcagcaccag
gacccctgcacttactcttcatgtaaaaatggcggctcgtgtcgcatggtgccccgtggg
aattcagtggaattcacgtgtttctgccggccaggcttcacggaccgcctatgtctgacg
cccatcgacaacgcctgtctcagtttaccctgccgtaacggtggcacttgcgacctggtc
aacctcaaagagtacaagtgtagatgtcctcctggctggtctggtaagcagtgccagcag
gcagacccctgtgcctctaatccctgtgccaacggcgggcagtgcacccccttcgagtcc
cactacatctgctcctgcacccccttcttctatggccagacctgcaagcaggacgtcaac
gagtgtgcccaaaacccctcaccctgcaagaatggaggcgtgtgtgtgaacgaggtgggc
acctaccgctgccagtgtccccaggagtatacgggcaagcactgcgatacccgctaccta
ccgtgcaacccctccccctgccacaacggggccacctgcgtccagaagggagacaccacc
tacgaatgctcctgtgtgccaggcttctcaggtcagaactgtgacgccaacattgatgac
tgtccaagacacgagtgtcagaatggaggaacctgtgtggacggagttaacacctataac
tgccaatgcaaacctgaattcacaggccagttctgtacagaggacgttgacgagtgccaa
ctgatgcccaacgcatgccagaatggtggaacgtgccacaacatctacggtgcctaccag
tgtgtgtgtgtcaacgggtggacgggggatgactgcggagagaatattgacgactgcgca
aatgcagcctgctatcagggggccgtctgccacgaccgtgtggcgtccttcttttgcgag
tgtccccatggtcgcacaggtctgctgtgtcacctggatgacgcctgtatcagtaacccc
tgtcagaaaggatccaactgtgacaccaaccccgtcaacggcaaggccatctgcacctgt
cccctgggctactttggcgccgcctgtgaccaggatgttgacgagtgctcgctgggtggc
aacccctgtgagcacggagggaagtgcctgaacaccaagggatcgttccagtgtaagtgt
cagcccggcttctctggagctcgctgtgaacacgacatcaacgagtgcctctccaacccc
tgccagaacgaagccacctgcctcgaccagataggaggcttccactgcatctgtatgcca
ggctacgagggactgttctgccagatcaatacggacgagtgcgccaacaacccctgcctg
aacaatgggaagtgtatcgataagatcaacaccttccactgccagtgccccacaggcttt
gctgggaacctttgccagatagatattgatgagtgctccagcacgccttgcaagaatggc
gccaagtgcacggatggccccaataagtacacctgtgaatgcactgaaggttacacgggg
caacactgtgagactgacatcaatgagtgtttctcggacccctgtcactatggtacttgt
aaggatggcctggcctccttcacctgctactgccgccttggttacacgggccggctgtgt
gagaccaacattaacgagtgtctgagtcagccctgtcggaacggaggcatctgccaggac
cgcgagaactcctacatctgcacctgtcccaagggcaccacaggtataaactgtgaagtc
aacctggacgactgcaagagcaagccatgtgactacgggacatgcctcgacaagatcaac
ggctacgagtgtgcctgtgagcccggctacagcgggaccatgtgcaacatcaacattgat
gagtgtgacctcaacccgtgtcacaatggtggcacctgcatcgatggcatcaacagcttc
acctgtttgtgcccagagggttaccatgacaccacctgcctcttccaggtcaacgagtgc
cttagcaacccctgtatccatggccactgtcaagacaaagtcaacggttacaactgtctg
tgtgacaatggctggagtggcaagaactgtgacatcaacaacaacgagtgcgagtccaac
ccctgcatgaacggaggcacctgcaaggatatgaccagcggatacgtctgctcatgtaga
gtgggcttcactggtccaagttgtcagacgaacatcaacgaatgtgcctccaatccatgt
ctgaaccaagggacctgcatcgatgatgtcgctggctacaagtgcaactgcctactccca
tataccggtgagaactgtgagaccctgctggcaccctgcagcaccaaaccctgcaagaac
gcaggtgtgtgtcaggagtctgaggactacgagaacttctcctgtgtgtgtccagagggc
tggcaaggccagacctgtgaggtggacattaacgagtgtgtgaagaacccctgtctcaat
ggggccacctgcgagaacaccaaaggcaactaccgctgtggctgcaaggccggctacgct
ggtcgcaactgcgagaccaacattgacgactgcaagcccaacccctgcagcaatggaggt
ttctgccgggacgaagtggacaactttgtgtgcacctgcctgcctggtttccgtggcact
aagtgtgaggaggacatcaacgagtgtgacagtaacccatgtaagaatggagccaactgt
accgactgtgtcaacagctacacctgcacctgtccctctggcttcagtgggatacactgt
gagaacaacacacctgactgcactgagagctcttgtttcaacggtgggacttgtctggac
ggcatcaacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacac
gacatcaacgagtgtgactccaggccctgcctgaacggaggcacctgccaggacagctat
ggcacctacaagtgcatctgtctccagggctacactggactcaactgccagaatctggta
cgctggtgtgactcgtctccctgtaagaacgggggcacctgttggcagactggcaccact
tacagctgtgagtgccagaccggctggacagggctctactgcgatgtgccaagcgtctcc
tgcgaggtggcagccaaacaaagaggtgtggaggtagttgctctgtgtcgaaactcaggc
cagtgtctggacgctgggaacacccactactgccactgccaggcgggctacactggcagc
tactgtgaggagcaggtggatgagtgcacccccaacccctgtcagaatggagccacctgc
actgacttcctaggagggtactcctgcaagtgcgtggcaggatacgtcgggacgaattgc
tccaacgagatcaatgagtgtttctcccagccgtgccagaatgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtcccaggggaacccaaggcgttcactgtgagatc
aacatagatgactgcaaccccttcacagaccccgtcaccaatgagcccaagtgcttcaac
aaggggaagtgtgttgacagggtgggaggttaccactgtatctgtcccgccggctacgta
ggggagcgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgacctgcgcggg
acacacaactgcgtccagctcaccaacaactaccgctgcgattgccgtactggatacaca
ggagagcgttgtgacacggtgtttgacggctgtaagggcaaaccctgtcgtaacggaggg
acatgtgccgtagccagcaacactcctcacggcttcatctgcaagtgtccacctggctac
actggctccacctgtgagtacgatgcccactcctgtggcaatcttcactgtcgtaacggt
ggcacctgcgtctccggacacaagaaccccaagtgtctctgtacctcctcgttcacgggg
ccagagtgtgaataccccacagacaacccttgtaacaccaacccttgctacaacggggga
acctgtgagtacagctcagaggctccgtactaccactgcgtctgccccaccaacttcaac
ggcctgctatgtcacatcctggactacagcttcctgggtgggttcggccgtgacatcacc
cccccgccggaggtggaggtgagctgtgagatcccccagtgtgaggaaacgaaggggaac
aagttctgtgatatgttgtgcaacaaccacgcgtgtggctgggacgggggcgactgctcg
ctcaacttcaacgacccgtggaagaactgcacgtcgtccctgcagtgctggcgctacttc
aacgacgggaagtgtgacgagcagtgcaacaacgccgggtgtctctacgatggctttgac
tgtcagaacctggagggccagtgcaatcctctgtacgaccagtactgtaaagaccactat
gcggacggccactgtgaccagggctgcaacaacgcagagtgtgagtgggacggtctggac
tgtgccaacaacatgccagagaagctggcggtgggccgcctggtcatcgtggtccacatc
atgcccgaccagctccggaacaactcgcttggcttcctgcgcgagctgagccgcgtgatc
cacaccaatgtggtgttccagcaggacgctaagggacagacgatgatctacccgtattac
ggcagtgagcaggagctgaagaaacacaacatgaagcgctcggtgggctggacagagatc
cctgacaccgttctcagctccatgaagaacagcatgtatactatagccaatggaagcaga
cgcagacgcagggagctggaccccatgcagatcaaaggctccatagtgtacctggagatt
gacaaccgccagtgcgtccagcagtccacggagtgcttccagagtgccactgacgtagca
gccttcctaggggccctggcctccagtgggaacctcaacgttccctacatcatagaggct
gttcacagtgaggttgacccccagcctccgtctgagctttaccccatctacgcggtcctg
gccgggctggccctcctggcttttgtgggtgtggggatggtcgcctcacggaagcgtcgt
cgcgagcacggccaattgtggttgccggagggcttcaagaccagtgagcccaacaagaag
aagaggagagagcccgtcggggaggattcggtgggattgaagccactgaaaaattccttg
gacatatcactgatggacaacaagcagaatgaatggggagaagaagagccttcagacgcc
aagcgctttaggcagtttgaggagcaggtgatgctggacctggatgaccagacggaccac
cgccagtggacccagcagcacctggatgcggctgatctccgtatcccctccatcgccccc
acaccccctcagggggagatcgagaacgactgcatggacgtcaacgtacggggaccagat
ggcttcacccccctgatgatcgcctcctgcagtggtggaggtctggaaaccggcaacagc
gaggaggaggaagatgcctctgccaacgtgatcaatgatttcatctaccagggtgccaaa
ctccacagtcagacggaccgcacgggggagaccgccctccatctcgctgcccgctacgcc
cgatccgacgctgccaagcgtctgctggaggccagtgcggatgccaacatccaggacaac
atgggcaagaccccgctacatgctgccgtggctgccgacgctcagggcgtcttccagatt
ttgatcaggaatcgtgccacagacctggatgcccgcatgcacgatggcaccacccctctg
atcctggcagcccgcctggcagtggagggcatggtggaggagctcatcaactgccacgct
gacgtcaacgctatcgatgacttcggcaaatctgctctgcactgggcagcagcagtgaac
aacgtggaagcagctatcgtactactgaagaacggcgccaacaaggacatgcagaacaac
aaggaggagacccctctgttccttgctgccagggaaggaagctacgagaccgccaaggtt
ctgctggagcactttgctaaccgcgagataactgatcacatggaccggctgccccgagac
attgcgcaagagaggatgcaccacgacattgtccgtctcatggatgagtacaacctggtc
cgcagtgcacccgtgcacagccatggccatggaggctccatgggcacgaccttgtccccc
cctctctgctcccccaatggctacctgggcagcatgaaggtccagggcaagaaggcccgc
aagcccagcgccaagggcatcggctgcaaggatggcaaggacatgaagaacaagaagaaa
gcctcccaggatgggaagggagggagtgtgctggatagctcagctgttctgtccccggtg
gactccctggagtctccacacgggtatatctctgacgtggcatcccctcccatgatgacg
tcccccttccagcagtccccgtccatgtcgctcaaccacctccaggggatgtccgacccc
cacatgggggtcaaccacatgggcatgcccaacaagcaggagctggcacacatgcagttc
gacccactcccgccccgtctcacccaccttcctgtgtcaggttccaacggctcggggggc
atgaatggccagtgtgattggctctccaggatgcacgccagcatgggccagcccagccag
ttcaatcccatgagggttggtcctgtcggtgggcagggcggtctgcaccaggggggcggg
cagcaaggcatgatcctccacaacgggctccccaccaccagcctgtcccagatgatgagc
taccagggcctgcagaacacccggctggcctcgcagccccaccttctgcagcaggcccag
cagcagatgcagcagcagatgcagcaccaacagaacctgcagcagcagctccagcagcag
caacagcaacagagcatccagctgcagcaccagaactctaacactggcaccagtggccat
tccatcagccagaacttcatcagcagcgagctgagtggctcagagctccagcagggcaca
gggaaccagggctccatgcctatccacaccatcctaccccaagagacccagatcatgagc
cagaacctgcccagcacccagtacctcacccctccctcccagcacagctactccggaccc
atggacaacaccccgaaccaccagctacaggtccccgaccacccctttctgaccccctcc
cccgggtctcccgaccaatggtctagctcctccccacattctaacatgtccgactggtca
gagggcatctcgagtccaccaaccagcagcatgcagtctcagatcggacatatccccgac
cagttcaagtag
DBGET
integrated database retrieval system
