Salvelinus sp. IW2-2015 (Arctic char): 111975796
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Entry
111975796 CDS
T05762
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111975796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
salp04090
]
111975796
04091 Lectins [BR:
salp04091
]
111975796
CD molecules [BR:
salp04090
]
Proteins
111975796
Lectins [BR:
salp04091
]
I-type lectins (Siglecs)
111975796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
ICAM1_3_5_D2
ICAM_N
REJ
Polyketide_cyc2
Motif
Other DBs
NCBI-GeneID:
111975796
NCBI-ProteinID:
XP_023860160
LinkDB
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Position
LG16:complement(8162988..8172000)
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AA seq
808 aa
AA seq
DB search
MYLILLWVLILPVTAFAFHMELKPKSGLLKVGDRHELQCSVKDCNEKVTISWALLEDKPM
FAKINTSGSESVAVFDPVAKAHDDTLLCKGSCGESTKQHRAVVKVYSFPEAPVISGHDRL
LLGQTNTLTCEVTDAYPAEHLRLEWLRGDSMLQTDAESVVSTYTFTPTPEDKEASITCRA
THDQEGVPDDEKTKETSVSLTVLYAPQITSISELTVVRVGSSPTLLCHAEGNPRPEIQWK
TIGSHGQAVIVGQSEELVLTEMTLVDSGQYECVASNTIGNITASVNVIVEAPPTNTSIKV
RPASKVKEGENVTVSCLSDGAPVGRMVLRRFSEDQDVALQSSNGSSTSFTLSSALLADSA
LYQCEAFNEHGSQKVSTLLSVEAYPLEVEMVSGVMAEMGSKLVLSCLASGCPQPAFSWRS
MLDMPVHSRARNQDSLSQLHLGPLGLAHEQAYTCEAKCGSVIKAKQTEVKVFSFPSDPII
ENPGPFLEDGKATLYCSVADVYPASHMQIQWLDGETELHSSVGQYSSELQNVTSTFSFSV
EPEDQGRRITCRVGLQMDEVHQNRRERQAVTVLELHYAPRGTTITVSPASEVKEGENVTV
SCLSDGAPVGWMVLRRLSEDQDVKLQTHNGSSTSFTLSSALLADSALYQCEAFNEHGSQR
ASTHVTVKAPPRNTTVLVYPSTEVQEGQNVTVCCRSVSFPPPVVVLRKLNNGTELYSLDG
NFLLVNLTPNDTGLYQVNVTNDLGYETKIFSINVMEKHSSPSPDWNQIVIPAVCVGMMVT
TTVLVLDNLRRARRKGSYELAKCKPGTA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcattctgttatgggtattgatactaccagtaacagcatttgcatttcatatg
gagctaaaaccaaagagtggacttttgaaagttggtgataggcatgagctgcaatgctcg
gtgaaggattgcaatgaaaaggttaccatctcctgggctttgctggaggataagccaatg
tttgcgaaaataaacacctccgggtcggaatcagtggcggtctttgaccctgtggcgaaa
gcacatgatgacacacttctctgcaaaggcagttgcggagaatcgaccaaacaacaccgt
gcggttgtcaaagtatactcatttccagaggcccctgtcatatcaggccatgaccgactt
ctcttgggccagaccaacactctgacatgtgaggtgacagacgcttatcctgcagagcac
ctgaggcttgagtggctgcgaggagacagcatgctccagacagatgcagagtctgtggtg
tccacctacacgttcacacccacccccgaggacaaagaggcgagcatcacctgcagagcc
actcacgatcaggagggtgtgcctgatgatgagaagaccaaggaaacctctgtttctctc
acagtgctttatgcaccacagattacgtcaatatctgagctgactgttgtgagagttggc
tccagtcccacattgttgtgccatgctgaagggaaccccagaccagagatacagtggaag
accattggttcgcacggacaggctgtcatagtagggcagagcgaggagcttgtccttaca
gagatgacactggtggattctggtcaatatgagtgtgtggcaagcaacaccattggaaac
atcacagccagcgtgaacgtcattgttgaagctcccccaacaaacacctccatcaaagta
agaccagccagtaaggtgaaagaaggggagaacgtgacggtgtcctgcctgtcagacgga
gctccggtgggacggatggtgctgaggaggttctctgaggaccaggatgtagctcttcag
tccagcaacggctcctccacctccttcaccctctcctctgccctgctagcagactctgct
ctctaccagtgcgaggccttcaatgagcacggcagccagaaagtcagcaccttgctctcc
gttgaagcgtatcccctggaggtggagatggtatcgggggtgatggctgagatgggatcc
aaactggtgctctcctgcctggcttcgggctgtccccagccagccttctcctggaggagc
atgctggacatgcccgtccacagccgcgcacgcaaccaggactccctctcccagctccac
ctgggcccacttgggctggcccatgagcaagcctacacctgcgaggccaagtgtggctct
gtcatcaaggccaagcaaacagaggtcaaggtcttctctttcccctcggaccctatcatc
gagaaccctggaccgtttctggaagacgggaaggccaccttatattgttctgtagccgat
gtctacccagccagtcacatgcagattcaatggctcgatggggaaactgagctacactcc
agtgtgggtcagtactccagtgagctccagaatgtgacgtcaacgttctctttttcggtg
gaaccagaggatcaggggagacggatcacctgcagagtcggtcttcagatggacgaagtc
catcaaaatcggagagagaggcaggcggtgactgtactggagctccactatgcccccagg
ggaaccaccatcacagtgagtccagccagtgaggtgaaggaaggggagaacgtgacggtg
tcctgcctgtcggacggcgctccagtgggatggatggtgctaaggagactctctgaggac
caggatgtaaagctccagacccacaacggctcctccacctccttcaccctctcctctgcc
ctgctagcagactctgctctctaccagtgtgaggccttcaatgagcacggcagccagaga
gccagcacacacgttacagtcaaagcacctcctaggaatacaacagttctggtctatccg
tccactgaggttcaggaaggccaaaatgtcaccgtatgctgtcgctctgttagtttcccc
ccacctgttgtggttttgagaaaactgaacaatggcacagagctctactccctggatggg
aacttcctgctggtgaaccttacgcccaacgatacaggtctataccaggtgaatgtgacc
aatgacctgggctacgagactaagatcttcagcattaacgtcatggagaagcattccagt
ccttcacccgactggaaccagatagtcattcctgctgtctgcgtgggaatgatggtgacc
accacagtcctagtcctggacaatcttaggagagccaggaggaagggctcctatgagctg
gccaagtgtaagcccggcactgcatag
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