Salvelinus sp. IW2-2015 (Arctic char): 111975851
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Entry
111975851 CDS
T05762
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
salp01100
Metabolic pathways
Module
salp_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
salp_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111975851
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111975851
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
111975851
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111975851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
111975851
NCBI-ProteinID:
XP_023860272
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All DBs
Position
LG16:complement(21075158..21087340)
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AA seq
372 aa
AA seq
DB search
MFMNFRRIRRCQCVQLVTTGFVLSVLMVCWEQLDHHVENRYLVNSYDFINKSFGISQQES
ESLSNFLYLINHHDKCNSNEVLLLLFVKSSPENLERRQAIRATWGNENYIQKELGATVRV
VFALGVYSNPQQRGSVQRGLLGEDQVYGDLVQQDFVDTFHNLTIKLLLQFRWRHTYCSKA
RFLMSADDDIFVHMPNLVHYLQGLIQQGARDLWVGHVHRGAPPIRQKDSKYHVPYEMYQW
PSYPDYTAGAGYVVSRDVAAKIYQATLFLNASLYIDDVFMGICANAMGVSPQEHVYFSGE
GKAPYHPCIYDKMITSHGHVADVRYLWKAAMDPQIHDISSGQVGKLYCTAVKIMLLCKPY
YLNTYPCKAAFS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgaatttcagaaggatcagaagatgtcaatgtgtgcagctggtgacgacaggc
tttgtcctgtctgtgttgatggtttgctgggagcagctggaccaccatgtggagaaccgc
tacttggtcaacagctatgacttcatcaacaagagctttggcatcagccagcaggagtcg
gaaagcctgagcaacttcctgtacctcatcaaccaccatgacaagtgtaacagcaatgaa
gtgctgctgctgctgtttgtcaaatcttccccagagaacctggagaggagacaggccatc
cgggccacctgggggaatgagaactacatccaaaaggagctgggggccaccgtgagggtg
gtgtttgccctgggggtctactccaacccccagcagaggggcagtgtgcagagagggctg
ctgggggaggaccaggtctatggggacctggtccagcaggactttgtggacacctttcac
aacctcaccatcaaactgctgctgcagttccgctggagacacacctactgcagcaaagca
cgcttcctcatgtcagccgacgacgacatctttgtccacatgcccaacctggtgcactac
ctgcagggcctgatccagcagggggcccgggacctctgggtgggccacgtgcacagggga
gccccccctatccgccagaaggacagcaagtaccacgtgccttatgagatgtaccagtgg
ccctcctacccagactacaccgcgggggcagggtatgtagtctcaagggacgtggctgcc
aaaatctaccaggcaactctgttcctcaatgcctcgctgtacattgacgatgtgttcatg
ggcatctgtgccaacgccatgggggtgtctccccaagaacatgtttacttttcaggggaa
gggaaggccccctatcacccctgcatctatgataagatgatcacctctcacggacatgtg
gcagacgtccgctacctgtggaaggcagctatggacccacagattcatgacatttcctct
ggccaggtgggaaagctgtactgcacagcagtgaaaatcatgctcctctgtaaaccttac
tatttaaatacctatccatgcaaggcagccttttcatag
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