Salvelinus sp. IW2-2015 (Arctic char): 111975916
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Entry
111975916 CDS
T05762
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111975916
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111975916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111975916
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
111975916
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Mis12
Motif
Other DBs
NCBI-GeneID:
111975916
NCBI-ProteinID:
XP_023860361
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Position
LG16:complement(8990628..9031039)
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AA seq
1041 aa
AA seq
DB search
MGASVNSSFRRLKALPVSADQRKRAGPPFSSENRFHLQMVTRIPPSGLSELLLTILQRRG
WQEGMAVLCQGWEEAGLLELLELQSRLGWGGTRWHLRALLNLTRAGPTESEIQDFLSEHF
RGQGPSQILPPAAVLLFGADPECAAAVLRSAQDLGHTLPTVHWVLGYPLSPDTLHSIGLP
LGLLAYGEVERKPLDFYIRDALQLVGQAVAAATVVRPDLALIQNMVNCYDKPNKHEVPSS
GQYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLRRDAVGQPTWVTVGSWEGGR
LKVEDQSLWQGPNGKGQDRGEGQRSGGRWQPGMPVADSRVRVVTLVEHPFVFTREVDEDG
NCPAGQYCLDAGTNSSDMLESYFSERASGNSTFLPTDYSKCCYGYCIDLLEKLAEDLRFE
YDLYIVGDGKYGASKSGRWTGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSLG
ILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRVF
SYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTF
EELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLKV
DPPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISRY
KSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEHA
FYHMVLPRIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQDTNTEKSCCIQKNQHPQPPP
DPLLSRASAKWNNENSRDAAAAKDNKRVHFNLETLNSRRLLARAVTKSEGGRGGEGIPGA
NQATRVCANGGFGTSFASLVLSLPSSSSSSIPSSSSLGVPPRPGELQELQEKIDLIRDQL
RTALARRAELQTSLAKEKAACSAPIVSGTPPVVLAAASLHTSTKTTSSLPSTRCATTMTD
PVLKALPTVRTAPAKHTNEKR
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtcggtgaacagctccttcagacgactgaaagctctgcccgtctctgctgac
cagcgcaagcgcgccggcccccccttcagcagtgagaaccgcttccacttgcagatggtt
acgcggatcccaccgtcaggcctgtcagagctgctgctgactattctccagcggagrggc
tggcaggagggcatggctgtgctgtgccagggctgggaggaggctggcctgctggaacta
ctggagctccagagccgccttggctggggcggcacccgctggcacctccgagccctcctc
aacctcacccgggccgggcccacagaatccgaaatccaggacttcctttcggaacacttc
cggggacaggggccaagtcagattctgccaccagccgcggtactgctgttcggggccgac
ccggagtgtgcagcggcggtgctgcggagtgcccaggacttggggcatacgctgcccaca
gtgcactgggtgctgggctacccactgagccccgacaccctgcactccatcggcctgccc
ctggggctgctagcctacggtgaggtggagcgcaagccgctggacttctacatccgcgac
gcgctgcagctggtgggccaagctgtggcagcagccacagtggtgcgtcccgacctggcg
ctcatccagaacatggtcaactgctacgacaagcccaacaagcacgaggtgccctcgtcc
ggacagtatctcgccagattcctgtctaacacgtcgttctcagggctgacagggccggtg
tcggtgcagaggaacctgtcccgggttctcacctctcagcgcttccacatctggagcctg
cggcgggatgcggtgggccagcccacctgggtgacggtgggcagctgggaggggggccgc
ctgaaggtggaggaccagagcctttggcagggtcccaatggcaagggccargaccggggg
gagggccagaggagtgggggccggtggcagccaggcatgcctgtggcagacagccgggtg
cgggtagttaccctggtggagcatccctttgtattcacgcgggaagtcgatgaggacggg
aactgcccggcgggacagtactgcctggacgcagggacgaacagctcggacatgctggag
agctacttcagcgagcgtgcctcgggaaactctaccttcctgcccacggactacagcaag
tgttgctacggatactgcattgacctgctggagaaactggcagaggacttgcgctttgag
tacgacctgtacatcgtgggtgacgggaagtatggagcgtcgaagagcggccgctggaca
gggctggtgggcgacctgctcaatggcgtggccgacatggccgtcacctcattcagcatt
aactcagtgcgtagccgcgtcatcgacttcacctcgcccttcttctccacctcgctgggc
atcctggtgcgcagcaaggacacagcggcgcccattggtgccttcatgtggccccttcac
tggtccatgtgggtgggtatcttcgtggcactgcacatcaccgccctcttcctcaccctc
tacgagtggaaaagcccttttggcatgacgccacacggacgcaaccgcctgcgggtcttc
tcctactcgtcggcgctcaacctgtgctacgccatcctgttcggccgcacggtctccagc
aagacgcccaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgcctg
ctggtgctgtccagctatacagccaacctggccgccgtcatggtcggcgagaagaccttc
gaggagctctcggggatccacgacgccaagctccatcacccatcccatggtttcaggttt
ggcacagtgagggaaagcagcgctgaggagtacatgaagaagagtttcccagagatgcac
gagtacatgaggcgctacaatgagcccaccacacccgatggggtgtccaccctcaaggta
gatccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtgtcc
atcgacgcagactgcaagctgctcaccgtgggcaaacccttcgccatcgaaggctatgga
ataggcctaccgcagaactcccctctgaccaacaacgtgtcagagttcatcagtcgctac
aagtcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccctgtggg
aagagggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcagggctg
tttgtgctgctgtgtgtgggcgtggccacgtcgctgctcaccctggctggggagcacgcc
ttctatcacatggtgctgccccgcattcgacgacgacaaaagtacaagtactggctccac
accagccagaaaatccaccgagccctgaaccagacctatgaggacgtgaagaagaagcag
gacaccaacacagagaaaagctgctgcatccagaagaaccagcacccccagcctccccct
gacccccttctctccagggcatcggccaagtggaacaacgagaacagcagggacgctgca
gccgctaaggacaacaagcgcgtacactttaacctggagaccctcaacagccgccgcctg
ctagcccgggccgtgaccaagtccgaaggggggagagggggggaaggtatccctggggct
aaccaggcaacacgtgtctgcgcaaacggaggcttcgggacttcctttgccagcctggtg
ctctccctcccctcctcctcttcttcatccatcccttcatcttcctctttgggcgttcct
ccaaggccaggggagctacaagagctacaggagaagatcgacctgatccgggatcagcta
aggacggctctggccagaagggctgagctgcagacttctctggccaaggagaaggctgcc
tgctctgcacccatagtgtcaggaacgccccccgtggttttagccgcagcatccctccac
acctccaccaaaaccacctcgtccctcccctccacccgctgtgccaccaccatgacagac
cctgtcctcaaggccctgcccacagtccgcacagcccccgccaaacacaccaacgagaag
aggtga
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