Salvelinus sp. IW2-2015 (Arctic char): 111977882
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Entry
111977882 CDS
T05762
Symbol
trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111977882 (trmt2b)
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
111977882 (trmt2b)
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111977882 (trmt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
PrmA
Methyltransf_4
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Ubie_methyltran
NodS
Methyltransf_23
Methyltransf_12
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
111977882
NCBI-ProteinID:
XP_023863416
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All DBs
Position
LG18:48054729..48073598
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AA seq
506 aa
AA seq
DB search
MLLILAGLRPALLKHKIVNVLVKACLCSGAKVDDDTTTNPGKPPKLSKKKWRKKFRNKPA
SNEHLPWEERLADSVTPLWRLSYYDQLQLKQKHQERILLQLSDQLLCGESTQHKALTQCP
SPPRSTKLSFPLLPILPSPVRDGYRNKSTFSVNRGVDGNPKTVGFYVGTGKVGNIVCVNG
DHLLNMPERHKLVARCYQDFLRLSALEPCLLFHDGGHWREVTVRTNAAGHTMAIVYFHPQ
RLTPEEIEVHKSSLVEYFTQGPGAICQLDSLYFQESSMTRCSHEESPYQLLHGQPHIHEE
ILGFKFRISADAFFQVNQGAADSLYRTVREMGLPNGAREGGGGGTLLDVCCGTGAIGITM
SPRADRVIGIELIQQAVEDARHNAALNQIQNCEFLPGKAEVVLPGLMEVLGSTTDSGGPL
TAVVNPARAGLHYRVIRALRNNSSIRRLLYISCKPEGEAMRNFRELCCSPDPHRKLTGEA
FRPTVAVPVDMFPHTPHCELLLVFER
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaatactagcaggtttaaggccagcattactaaaacataagatagtaaatgtt
ctggtgaaggcatgtctatgctcgggagccaaggttgatgatgataccaccaccaaccca
gggaaaccaccaaaattatcaaagaaaaaatggagaaagaagttcaggaacaagcctgca
tcaaatgaacacctgccctgggaggagagactggccgactctgtcactcctctgtggcgg
ctgagttactacgatcaactccagctgaaacagaagcaccaggagaggatcctactacag
ctctcagatcagctcttatgtggagagtcgacccaacataaggccttgacacaatgtcct
tctccacccaggagtaccaaactcagcttccctctgctgcctatcttaccgtcacctgtc
agggacggctaccgcaacaagtctaccttctcggtcaaccgtggcgtggatggcaaccct
aagacggtggggttctacgtgggaacgggaaaggtgggaaacattgtgtgtgtgaacggg
gaccacctcctcaacatgcccgagagacataagctggtggccaggtgctaccaggacttc
ctccgcctttcagccctggagccctgtctgctgttccacgacggaggccactggagggag
gtgacagtgaggaccaacgcagcaggccacaccatggccatcgtctatttccacccacag
aggctcaccccggaggagatagaggtccataagtcctccctggtggagtacttcacccag
gggcctggtgccatctgccaactagactccctgtacttccaggagagctccatgacccgt
tgcagccacgaggaatccccctaccagctgctgcatggccagccacacatacacgaggag
attttggggttcaagttccgcatctcggcagacgccttcttccaggtgaaccaaggggcg
gcggattcgctgtaccgcacagtgagagagatgggcctcccgaatggagctcgagaggga
ggaggagggggcacactcttggatgtgtgctgtggaacgggggccatcggtatcaccatg
tcccccagagcggaccgggtcatcgggatagaacttatccagcaggccgtggaagacgcc
aggcacaacgcagccctcaaccagatccagaattgtgagttcctccctgggaaagccgag
gttgtccttcctgggctcatggaggtcctgggctccaccactgactctggaggccccctc
acggctgtggtgaacccagcccgcgctggcctgcattatcgtgtgatccgggctctaagg
aataactcatccatccgcaggctgctctatatttcctgcaaacccgaaggagaggccatg
aggaacttcagggagctgtgttgcagtcccgacccacataggaagctgacaggcgaggct
ttcaggccgactgtggctgtgcctgtggatatgttccctcacacgccacactgcgaactg
ctgctggtctttgaaagatag
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