Salvelinus sp. IW2-2015 (Arctic char): 111978309
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Entry
111978309 CDS
T05762
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111978309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111978309
03036 Chromosome and associated proteins [BR:
salp03036
]
111978309
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
111978309
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111978309
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
111978309
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111978309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-LYAR
zf-C2H2_6
zf_C2H2_ZHX
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
111978309
NCBI-ProteinID:
XP_023864065
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Position
LG18:67454189..67460954
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AA seq
782 aa
AA seq
DB search
MSDEVIIVEWAETGASEEGCQAQLITDKASAVLPDSLVQNILVNTVVQGQEEDHPLLDDN
GNDLYCEECHASYKDQCDIQGGLSFMLDSPTPVGLPQRALLTLPHGLVVGRSSIPGAGLG
VLNQGAIVAPGMHFGPCEGEVTTRDSAVTSDYSWEVWNSKGESEYIDSARDTHSNWMRYV
NCARNVEEGNLIALQYRGIVFFHCCRSILPGDELLFWPGGRFIDRFRDPSDQIWLRKSTP
SEVNTNLSSQVFLCCQCQLSFTTETYIQRHKEQLHPLDLSPASALSELENHLSNSNMNPD
PMSSSVRELGYRCPQRPKSFKQKGHVQRTMRAVHSNVRPYCCPQCRKCFAQGYDLASHQL
RVHPRKKKPGVVEVRGEEVRGESSLPPPSDSAWEPEPPSNDQPTETQTGRASSQRLRNLR
VKSTRNSKAKTKANTLKQRETSTKKRFHSDPNPDALDMEVERREAVGEAQYSCIDCQETF
GNPESLKVHQCIRVVVGPPPYSCSTCRVTFKRYTTLKKHKVNKHPKENMLYCCTHCGRFF
SQAAGLQHHLDAEVCKDIQLSTKAVPCSYCQFSFTEERYLRKHVKRHHPDEHVSQATGLG
SGLIQSEQKAGDAGEVHLCLQCGKSYEHVQSFKAHRCFQSDAAKLHLCNDCGKGFSCFYS
LKQHQRIHTGEKPYRCSYCEKCFSHSGHLNVHVRIHTGEKSFLCTECGESFRQSGDLKRH
ERKHTGVKPCTCPECGKSFSRPQSLKAHLMLHNGERQYKCDQCGKSFSRNYHLTRHHEKT
HS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgaagtgatcatcgtggagtgggcagagactggtgcatcagaagagggatgt
caagcccaactcattacagacaaagcctctgcagtgttgcccgacagcctggtccagaat
atattggtgaacactgtggtacaaggccaagaggaggatcatccactactagatgacaac
ggcaatgacctctattgtgaggagtgtcatgcctcctacaaagaccagtgtgatatccaa
ggtggtctgtccttcatgctggactctcccacaccagtgggcttaccccagagggccctc
ctcaccctaccccatgggctggtggtgggcaggtccagtatccctggggcaggcctgggg
gttctaaaccaaggagcaattgtggccccgggaatgcactttggcccctgtgagggggag
gtgactaccagggacagcgcagtaacaagtgactactcctgggaggtctggaacagtaag
ggtgaatctgagtacattgattctgcaagagacactcattccaactggatgaggtatgtt
aactgtgctcgtaatgtagaggagggtaatctcatagcactccagtacagggggattgtt
ttcttccactgctgccgctctatcctcccaggagatgagctcctgttttggcctgggggg
cgattcatcgacaggtttagggacccctctgaccaaatctggctccgaaagagcacccct
tcagaggttaatacaaatttatcgtctcaggttttcctctgctgtcagtgccagctttct
ttcaccactgagacctacatccaaagacataaagagcaattacaccctctggacctatca
cctgcgtctgcactgagtgagcttgaaaatcacctttctaacagtaacatgaacccagac
cctatgtcgtcctctgtccgtgagttgggctaccggtgccctcagcgtcctaagagcttt
aagcagaagggccacgtccagagaaccatgcgagctgtccactccaacgtcagaccctac
tgctgcccccagtgcaggaagtgtttcgctcaggggtacgacctggcaagtcaccagcta
cgagttcacccaaggaagaagaagcctggagtggtagaggtcagaggtgaggaggtcaga
ggtgagagttcgctcccgcctccttctgacagcgcctgggaacccgagcctccgtccaat
gatcaacctacagagacccagacagggagagcttcctcacagagactgaggaacctcagg
gtaaagtccaccaggaactctaaggccaaaactaaggcaaacacactgaaacaaagagaa
accagtaccaagaagaggttccattcagatcccaatccagacgctctggacatggaggtg
gagaggagagaggctgtaggagaggcacagtacagctgcattgattgtcaggaaaccttc
ggcaacccagagtcccttaaagtccatcagtgcatccgggtcgtggtggggccaccgccg
tactcttgctctacatgcagggttaccttcaaacggtacaccaccctgaagaagcacaag
gtcaacaagcatccaaaggaaaacatgctttattgctgcacccactgtgggaggttctty
agtcaggctgccggtctacagcaccacctggatgcagaggtatgtaaggacatccagctg
agcactaaagctgttccttgctcytactgccagttctccttcaccgaggagaggtacctc
cggaagcacgttaagagacaccaccctgatgagcatgtctctcaggccacaggcctgggc
tcagggctaattcagtcggagcagaaggctggagatgcaggagaagttcacctgtgcttg
cagtgtggaaagagctacgagcacgttcaaagcttcaaagctcaccggtgtttccagtca
gacgcagccaaactgcacttgtgcaatgactgtgggaaaggtttctcttgtttctacagc
cttaagcagcatcagcggattcacacgggagagaagccataccgctgctcttactgtgag
aagtgttttagccactctggacatctgaatgtgcacgtgaggatacacacaggggagaaa
tctttcctgtgtactgagtgtggagagagtttccgtcagtctggggatctgaagcgtcat
gagagaaaacacactggggtgaaaccatgtacctgtcctgaatgtgggaaaagcttcagt
cgacctcagagtctgaaagctcacctgatgctgcacaacggagagagacagtacaagtgt
gatcagtgtgggaaaagtttttcacgaaattatcacctgacgagacaccatgaaaagaca
cactcataa
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