Salvelinus sp. IW2-2015 (Arctic char): 111978993
Help
Entry
111978993 CDS
T05762
Name
(RefSeq) glycogen debranching enzyme isoform X1
KO
K01196
glycogen debranching enzyme [EC:
2.4.1.25
3.2.1.33
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00500
Starch and sucrose metabolism
salp01100
Metabolic pathways
Module
salp_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
111978993
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
111978993
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.33 amylo-alpha-1,6-glucosidase
111978993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hDGE_amylase
GDE_C
hGDE_central
hGDE_N
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
111978993
NCBI-ProteinID:
XP_023865021
LinkDB
All DBs
Position
LG19:29324682..29354421
Genome browser
AA seq
1538 aa
AA seq
DB search
MSLQAKQVRVLVLNDMEQLGRTLFRLDQGFELQFRLGPTLQGKHVHVHTNYPAPGKHFDR
HTFQALDWHNPMGREDDSDKFCTLDLQIAGSYQYYFGHGHEEKSGGGYIVVDPVLRAGAD
NHHVHLDCITIQTYLSKCLGHLDDWPARLRVAKESGYNMIHFTPLQTLGNSRSCYSLADQ
LSLNPEFSPPGKNYTWTEVGDLVQKLKKEWNMICITDVVYNHTAANSPWIKEHPECGYNL
VNSPHLRSAWVLDRAIWHMTCNMADAKYAAMGLPAQVQNEGHLNAIRNVLWEQVFPKVKL
WEFFQVKIESTVEEFRTLLTEGAKPDQKKTGGKQGLKIIQDPMFRRFGNKVDMDSALETF
VPHSRSPQAILEACNWLWGRLEEINKEQYQQMLHHQEQAANCIVGNVVYERLADHGPKLG
PVTRKDPIVTRYFTFPFEEKSLEDDLTMMDQPDKARHFLAHNGWVMGDDPLRNFAEPGSN
VYIRRELICWGDSVKLRYGNKPEDCPYLWAHMQKYTEITAKHFAGVRLDNCHSTPLHVAE
YMLDVARVLRPSLYVVAELFTGSEDLDNVFVTKLGITSLIREAMSAGDSHEEGRLVYRYG
GEPVGAFVQPSLRPLVPSIAHAMFLDVTHDNECPIQLRSAYDSLPSSAIVSMACCCSGST
RGYDEMVPHQISVVKEERFYPKWNPEAKASSPGEVNLKTGIIAGKLALNKMHQELASKGF
NQVYVDQVDEDIVAVTRHCPSTHQSVVAVCRTAFHNPKHHQYRKEVPPMFIPGKIEEVIL
EARIIDRQAGTYKKCEKYINGMPEYTVEIKEHIQLKDSGVVKHAGVTSKGSSEFVQEIIF
ERLTPGSVIAFRVSLDPKAQELVGVIRHHLIQFSPKYKPGSLPDQHTPTILETPLAQIMS
KLTLGDMNMLLFRCDSEEQEDGGGCYNIPSWTSFKYGGLQGLLSVMADIRPKNDLGHPVC
DNLRQGDWMIDYVSNRLVCHSGALGEVGKWLKAMFHYLKHIPRYLIPCYFDAILVGVYTT
ALDTTFNKMSSFVQNGSTFVKLLALGSVQMGGVGSFPALPPLSLELPDVPYRLNKDTGKK
EQCCVSLAAGLPHFSSGIFRCWGRDTFIALRGLMLVTGRHLEARNIILAFAGTLRHGLIP
NLLGEGICARFNCRDAVWWWLQCIQDYCTLVPEGIAILRCPVVRMYPRDDSEPQAPGTPS
LLTQPLCDVIHEAMTRHMQGIDFRERNAGPKIDMHMKDEGFNVVAKVHRDTGFVYGGNRF
NCGTWMDKMGESDKARNKGMPATPRDGSAVEIVGLSKSAVRWLVELHKKGLFPHSSMKIH
RDGKEVKVSYEEWNHKILANFEKNFYVSHDEKNPNEKHPDLVHKRGIYKDSHGASSPWCD
YQLRPNFCIAMVVAPELFTVERAWKALGMAEKKLLGPLGMKTLDPDDMVYCGVYDNALDN
DNYNVARGFNYHQGPEWLWPIGYFLRAKLYFAKKLGKETYEQTVYLVKSILSQHYVHLER
SSWKGLPELTNENGQYCPFSCESQAWSISTVLEVLHDI
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccaggcaaaacaagtcagagtcctggtcctcaacgatatggaacagctggga
aggacactcttccgtctggaccaaggctttgagctccagttccgtctgggccctactctc
cagggaaaacatgtgcatgtgcacactaactaccctgccccgggcaaacactttgaccgt
cacaccttccaggccctggactggcacaaccccatgggaagagaggacgactctgacaag
ttttgcaccctagacctacagatcgctggatcataccaatactactttggtcacggccat
gaggagaagtcaggyggtggctacatagtggtggaccctgtgctgcgtgccggtgctgac
aaccaccacgtccatctggactgtatcaccatccagacctacctgtccaaatgcttggga
cacctggatgactggccagccagactgagggtggccaaggagtctggctacaacatgatc
cacttcaccccactacagactctagggaattccaggtcctgctactccctagctgaccaa
ctaagcctgaacccagagttttcaccaccgggaaagaactacacctggacagaagtggga
gatttggtgcagaaactgaagaaagaatggaatatgatctgtattactgacgtggtctac
aatcacacagccgccaacagcccgtggatcaaggagcatcctgagtgtggctacaacctg
gtcaactccccccacctgaggtcagcctgggtcctggaccgggccatatggcacatgacc
tgcaacatggctgacgctaagtacgctgctatgggcctccccgcccaggtccaaaacgag
gggcacctcaatgcgatccgcaatgttttgtgggagcaggtgttccccaaggtcaagctg
tgggaattcttccaggtcaaaatcgagagcactgtggaggagttcaggaccctgctcaca
gaaggagcaaaaccagaccagaagaagactgggggtaaacagggacttaagatcatccag
gaccccatgttcagacggttcggaaataaagtggatatggactctgcactagagaccttt
gtgcctcacagccgcagtcctcaagccattctggaggcctgtaactggctgtgggggaga
ttggaggagatcaataaagagcagtaccagcagatgttacaccaccaggagcaggctgct
aactgcatcgtgggaaatgtagtttatgagcgcctggctgaccacgggcccaagctgggc
cccgtcaccaggaaagaccctattgttaccagatacttcaccttcccattcgaggagaaa
agcctggaggatgacctgacaatgatggaccagccagacaaggcccgtcacttcctggct
cacaacggctgggtgatgggagatgaccctcttaggaactttgctgagccaggctccaac
gtgtacatcaggagagagttgatctgctggggcgacagtgtcaaacttcgttacggcaac
aagcccgaggactgtccctacctgtgggcccacatgcagaagtacacagagatcacggcc
aagcacttcgctggggtccgcctggacaactgtcactccacccctctgcatgtcgctgag
tacatgttggacgtggctcgtgtgttgaggcccagtctgtacgtggtggctgagctgttc
acgggcagcgaggacctggacaatgtctttgtgactaagctaggcattacctcgctcatc
agagaggcaatgagtgcaggggacagtcacgaggagggcagacttgtgtacaggtacgga
ggggagcccgtcggggccttcgtccagcccagcctccgccccctggtgcccagcatcgcc
cacgccatgttcctggacgtcacccacgacaacgagtgccccatccagctccgctctgcg
tacgactcgctccccagttctgccatcgtctcaatggcctgctgttgctctggcagcacc
aggggatatgatgagatggtgcctcaccagatctcagtggtcaaggaggagcgtttctac
cccaagtggaaccctgaagccaaggcctcgtcacccggggaggtcaacctgaagacgggt
atcatcgctggcaagctggccctcaacaaaatgcaccaggaactggcttccaagggcttc
aaccaggtgtacgttgaccaggtggacgaggacattgtggcggtgacgcgtcactgtccc
agcacccaccagtctgtggtggccgtgtgtcgcactgccttccacaaccccaaacaccac
cagtacaggaaggaggttccacccatgtttatccctggtaaaattgaggaggtcattctg
gaggcgcgtatcattgaccggcaagccggcacctacaagaaatgcgagaagtacatcaac
ggcatgccggagtacaccgtggagattaaggagcacatccagctgaaagatagtggcgtt
gtaaaacacgcaggcgtgacgtctaagggcagcagtgagtttgtccaggagatcatcttc
gagcgcctcacccctggcagcgtcatcgccttcagggtgagtctggaccctaaggcccag
gagctggtgggagtcatcagacatcacctgatccaattcagccccaagtacaagcctggc
agtctgcctgaccagcacacaccaaccatactggagacaccactggcacagatcatgtct
aagctgactctgggcgacatgaacatgctgctgttccgctgtgactctgaggaacaggag
gacggaggaggctgctacaacatcccttcctggaccagcttcaagtacggtggcctgcaa
ggtcttctgtcagtgatggcggacattcgtcccaagaacgaccttggccacccggtgtgt
gacaacctgagacagggggactggatgatcgactacgtcagtaacaggctggtgtgccac
agtggcgctctaggagaggtggggaagtggctcaaggcgatgttccattatctgaagcac
atccctcgctatctcatcccctgctactttgatgccattttagtgggagtctacaccacr
gctcttgacaccaccttcaacaagatgtccagttttgtccagaacggctcgacctttgtc
aaactgctggccctgggctctgtccagatgggtggtgtgggcagtttcccggctctgccc
cccttatccctggaactacccgacgtcccctaccgcctcaacaaggacactggcaagaag
gagcagtgctgcgtctccctggccgcaggtctgcctcacttctcctctggaatcttccgc
tgctggggccgagacaccttcatcgctctgcgtggactcatgctggtcactggtcgtcac
ctggaggctagaaacatcatcctggcatttgcaggcaccctgagacacggtcttatcccc
aacctgttgggcgagggcatctgtgcccgcttcaactgccgtgatgccgtgtggtggtgg
ctgcagtgcatccaggattactgtaccttggtgcctgagggcattgccatcctccgctgc
cctgtggtcaggatgtacccccgtgacgactctgagccccaggcccctggcactccgtcc
ctgctcacacagcccttgtgtgatgtcatccacgaggccatgacacgtcacatgcagggt
atcgacttcagggagcgcaacgcaggaccaaagatcgacatgcacatgaaggacgagggc
ttcaatgttgtggccaaagtgcaccgtgatactggctttgtttacggtggcaaccgcttc
aactgcggaacatggatggacaaaatgggagagagtgacaaagctcgcaacaagggcatg
cctgcaacacccagagatgggtcagcggtggagattgtgggcctcagtaagtctgcggtg
cgctggctggtggagctccataagaagggcctgttcccccacagctccatgaaaatacac
cgggatggtaaggaggtgaaggtttcctatgaggagtggaaccataagatcctggccaac
tttgagaagaacttctatgtgtcccacgacgagaagaaccccaacgagaagcaccccgac
ctggtccacaagagaggcatctacaaggacagccatggagcttccagcccatggtgtgac
taccagctcaggcccaacttttgcattgccatggtggtggctccggagttgttcactgtg
gagagagcctggaaggcactgggaatggctgagaagaagctgctaggacctctgggaatg
aagacgttggacccagatgatatggtgtactgcggtgtctatgacaacgccctggacaac
gataactacaacgtggccagaggtttcaactaccaccaaggaccagagtggctatggcca
attgggtacttcctgcgagcaaagctctattttgccaagaagcttgggaaggagacctat
gaacagacagtgtacctggtgaagagcattctctctcagcattatgtccacctggagagg
tctagctggaagggtctgccagagctgaccaatgagaatggccagtactgtcccttcagc
tgcgaatcacaagcctggtccatctccacggtgctggaagtcctccacgacatatag
DBGET
integrated database retrieval system
