Salvelinus sp. IW2-2015 (Arctic char): 111979664
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Entry
111979664 CDS
T05762
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
salp01100
Metabolic pathways
Module
salp_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
salp_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111979664
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111979664
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
111979664
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111979664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
111979664
NCBI-ProteinID:
XP_023866051
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Position
LG19:complement(33453325..33468659)
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AA seq
383 aa
AA seq
DB search
MFVNFRRIRKCQCLQLMTTCLVLSVVMVCWDGSVVSHVKSYSYHYLVNRYTFINKSFTIP
RQEAHMFSNHRYLLNHPYKCSGEKNVLLLLLVKSSPENIERRRAIRSTWGNETXIXQTLG
VXVKVVFVLGLPKQHEAAHTRRSRGGTQDNLVREDRLNGDLIQQDFVDSFHNLTLKLLLQ
FRWAHAYCPHAHFLMTSDDDIFVHMPNLVRYLQDIDRKGVTDFWIGRVHRGAPPIRRKES
KYYVSYEMYPWLAYPDYTAGAGYVVSRDVANKIYQASLTLNASLYIDDVFMGICANAMGV
LPQEHVYFSGEGKAPYHLCIYDKMMTSHGHVADIYELWKAATNPEVKRVTSGLFGRLYCT
AVKLTLLCRPYFFNSYPCKAALL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaattttcggcggatccgcaagtgccagtgcttgcagctaatgaccacgtgc
ctggtgctgtcggtggtgatggtgtgctgggatggcagcgtggtgagccacgtcaagtcc
tactcctaccactacctggtcaaccgctacaccttcatcaacaagagcttcaccatcccg
cggcaggaggcccacatgttcagcaaccaccgctacctgctcaaccacccgtataagtgc
tcaggagagaagaacgttttactgctgctgctagtcaagtcctccccagagaacatcgag
agacggcgagccatacggtcgacgtggggcaacgagacctasatcygccagaccctgggg
gtgaytgtgaaggtggtttttgtgctgggcctccccaagcagcacgaagctgcccatact
cggaggagccgagggggcacccaggacaaccttgtccgtgaagaccgcttgaatggcgac
ttgatccaacaggactttgtggactcgttccacaacctaaccctcaagcttctgctacag
ttccggtgggcgcacgcctactgcccgcacgcccacttcctcatgacgtctgacgatgac
attttcgtgcacatgcccaacctggtgcgctaccttcaggacatagacaggaagggcgtt
acagacttctggatcggtcgcgtgcacagaggcgcgccacccatccgccggaaggaaagc
aagtactatgtctcatacgagatgtacccgtggttggcatacccrgactacacggcaggg
gcgggttacgttgtctcgagagacgtggcgaacaaaatctaccaggcttcgttgaccctc
aacgcctcgctgtacatcgacgatgtcttcatgggcatctgcgccaacgccatgggcgtg
ttgccgcaggagcatgtgtacttctcaggtgagggcaaggcgccctaccacctttgcatc
tacgacaagatgatgacgtcgcacggccacgtggccgacatatacgaactctggaaagcc
gccacgaatccggaggtcaaacgggtcacgtcaggactctttgggaggttgtattgcaca
gctgtgaaactcacccttctttgtagaccgtatttctttaacagctacccctgcaaggca
gccttgttgtag
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