Salvelinus sp. IW2-2015 (Arctic char): 111980678
Help
Entry
111980678 CDS
T05762
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00780
Biotin metabolism
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
111980678 (hlcs)
Enzymes [BR:
salp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
111980678 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
111980678 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
111980678 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
111980678 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
111980678
NCBI-ProteinID:
XP_023867311
LinkDB
All DBs
Position
LG20:complement(36926904..36966783)
Genome browser
AA seq
947 aa
AA seq
DB search
MLITLCYVYLWVRFQKCYTVVIRSTLHRLCGGSKTNASNVSFTFCALNPLGKPQLQKGQP
TCLQSVNKQLSPPLPEEDVFLKLGDKAIYITEPQACEDLSKWTLLWGSSLSCGPRIENIS
FIIEATSGQRVGSQAHHTKENKKVLKWSDYCLPLACSPVQPFRAVAQASVDNFSRLGVAF
MEDRLQLDNGLVPSKIVSVLLRESAFKELLEKGKSEKHITSLCLKKQTEIILSEPSPCEW
EVLSVRGDLQLTQNRKCSLLQPPEIQRALVERRGSEPLRGASPGVDSGDNSLGINHQHME
GHGRHLHLSSCHECLELENSTILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEAE
SFVGQSRRVNVTGKPPNVLVFTGGCQERFQRMRSLLGECIDMDSYTVYPLRPQQALSEPW
LESATLLVLASDEPLTPQLQARFLAYLEQGGRVLGLSSTLCPTGLALVPRKSRRSQICRL
SFTKADTTELDLSVLASGSVFVRELQSGGDPGETEVWGELKWDGDGGDKDMVIVRVTRGE
DRGEAVLCQVHLETAPNSEDIVSSQGFDELKMSNACRYEVLTEIIISLGLSCEQSQAPPA
SPVYLLATSEERRASFLKWLHTQLDKEGLLKCSKAFLKVVPSAELQAGPPLLPKGTLALV
TDAPEAQSCEQFSLQTYSQHLETRALGRTLLYTQVTPTTMDLLEGLMLQLPEEMGLTAVA
ARQTQGRGRGGNAWLSPLGCAMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPGY
QDIDLRVKWPNDIYYGNLMKLGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVMQ
HNREHGTSLEALSSAQLIGRTLTCLEQLISDFQERGSEAVLPLYYKRWMHNGTQVRLWSE
DGPQAVVVGLDDNGFLQVRSEEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagtg
gtaattcggagcaccctgcacagattgtgcggggggagcaaaaccaatgcaagtaacgtt
agctttacattctgtgccttgaatccactggggaagcctcaacttcagaaaggacaacca
acctgcctgcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgaggacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccacggatagagaacatttct
ttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactaaagaa
aataaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccagtgcag
ccattcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcgttt
atggaagatcgccttcagctggacaacggactagtgccttcaaagatagtctctgtcctg
ctccgagaatctgcgttcaaagaacttctggagaagggaaagtcggaaaagcacatcact
tccctctgcctcaaaaaacagactgagatcatcctctctgagccttctccctgcgagtgg
gaggtactctcagtgagaggcgacctccagctaacacaaaataggaagtgcagcctgctc
caaccgccagagatccagagggctttagtggaaagacgaggctccgagcccctacgagga
gccagccctggggtggacagcggggacaactcacttggcatcaaccaccagcacatggag
ggccacggccgccacctccacctctccagctgccacgagtgcctggagctggaaaacagc
accatcctctccgtcaagtacgcctcggtcgacaacatccctgaccttcccgatgactac
gccacatgcacggacagcggggacgagactctggacgagtttgaggaggatgaggcagag
agctttgttggtcaaagccggcgggtcaacgttaccgggaagccccccaacgtgctggtg
ttcacgggtggctgccaggagaggttccagaggatgcgttcgctgctgggcgagtgcatc
gacatggacagctacacggtgtaccccctgaggccccagcaagccctcagtgaaccctgg
ctggagagtgccaccctgctagtgctggcctcagacgaaccccttaccccccagctccag
gcccgtttccttgcatacctggagcagggtggcagggtcctggggctctcctccaccctc
tgccccacggggctggccctggtgcccaggaagagcaggaggagccagatctgcaggcta
agcttcaccaaggctgataccacagagctggatctgagtgtgcttgccagcgggagtgtg
tttgtcagggagctgcagagtggtggggaccctggagagacagaagtctggggggagctg
aagtgggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtggagag
gaccgaggggaggctgtgctgtgtcaggtgcacctggagacggcccccaactctgaagat
attgtgtcgtctcagggttttgacgagctgaagatgagcaatgcgtgtcgctacgaggtc
ctgacggagatcattatttccctgggcctgagctgtgagcagagtcaggccccgcccgcc
agccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctcaagtggctg
cacacccagttggacaaggaagggctgctcaagtgttccaaggcattccttaaagtggtc
cccagcgcagagcttcaggctgggccccccctgctgcccaaggggaccctggctctggtc
acggatgccccagaggcccagagctgtgagcagttcagcctgcagacctacagccagcac
ctggagacccgcgcgctgggacgcacccttctctacactcaggtcacccctaccaccatg
gacctactagaggggttgatgctccagctgcctgaggaaatggggttaactgctgtagcg
gctcgacagacccagggtagaggccgtggggggaatgcgtggctgagtcctctggggtgt
gccatgtttagtgtgcatgtgcaagtggctgtgagctccagactgggccagaggatcccc
ttcctgcagcacctggctgccctggctgtggtggaggccgtacgcacccttcccggttac
caggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatgaag
ctaggaggagtgttggtgacatcaacagtcatgggaccaaccttccatctcctcattggc
tgtggctttaacgtcagcaacagcaatcccaccattgccatcaacgacctggtgatgcag
cacaaccgagagcatggcacaagcctggaggcccttagctcagcccagctcatcggccgc
accctcacctgcctggagcagctcatctctgacttccaagaacgggggtcagaggccgtc
ctacccctctactacaagagatggatgcacaatgggacccaggtgcgtctgtggagtgag
gatggcccccaggctgtcgtggtgggcctcgacgacaacggcttcctgcaggtgcgctcc
gaggagcagggcgtggtctccgtgcagcctgacggcaactcctttgacatgctaaggaac
ctggtggtcaccaagcaacgctag
DBGET
integrated database retrieval system
