Salvelinus sp. IW2-2015 (Arctic char): 112069504
Help
Entry
112069504 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112069504
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112069504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112069504
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
112069504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
112069504
NCBI-ProteinID:
XP_023992615
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MGVRLGRLSDSPWWWPLLLLLLLCTAPWCQGRPFATPLPAVNVAVVFSGSAYQQEIKGRL
SRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQILDF
IALQTAVPIVGISGGSAMVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVITS
LYPGYEVYVDYVKTFTDTSYFMWELQDVLTFDMSADGMNDIRARRLLQQIDAQVLLVYCS
HEEAQYLFSMAGDAGLLGPGYIWILPSLAVGNPDMPPPKSFPVGLISIITDRXRMSLRKR
VRDGVAIVVKGVQSFRKQRGFIPEGHNDCHSPVKESSNDTLFRHMLNVTWEHNDFSFNPE
GYLINPAMVIITLDRERQWDKVGNYEMGILQMRYPVWPRYGTYLEPVSDNRHLTVATLEE
RPFVIVEAVDPMTGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTT
KFSYDLYLVTNGKHGKLVRGSWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYCSPVGYNRSLVSA
KDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKVMVLVWAFFAVIFLASYTANLAA
FMIQEQYTDTVSGLSDKKFQKPXEQYPPFRFGTVPNGSTERNIRSNYPEMHAHMVKYNQK
GVEDALNSLKSGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRW
KRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFSWEHLLYWKLRHSVRKSERLDFLLAISRGIYSCFNGVEDSDRNGNLQNPDVTTNYT
QANMLKMLQTAKDIVTSTRVENSLDNATKTIENWSRRGADNVRVGLPPRVATTIDMGHSR
LPYISSITDNHLPYPQRALASTFPIHYSDSATQPLLDKSRVVTRPTPLRYTLPARGSHHF
YERTLPISSLSSPHIAMRDPAPPSTSSHNPHPXHSSRLYVESQPRHPTSPFVPYREFQVP
DIYVEHHKGPLGRKFSYPPDHMGRKKRSHSYVFSEAQDTRXRNDYDEPTSCLAELRANHL
LNNQAPSASTIACMGGHYPSGSASCNSCMKPYLEPGMEDVPLLGKDKVNRRASFLKATWS
SDRIRQLGEKPSTSTMPDLFPRVVVANPKPHKLYGSQGNNLCYPLAAEPAYLDPAHMRSY
PYKQQKLKCSQSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLPQ
GPGQFYDKDMCHLFPCASHCPNNNALXPRMGDRQVVYQNNMFGGYEGAVGRSREEPPLPG
SGSRDRREVLVARRVNSPYVPKTWGRVSSLESEV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggccgcttgagcgactccccgtggtggtggccgctgctgctgctg
ttgctgctctgcactgccccctggtgccaaggtcggcctttcgcaacgcccttgccagca
gtcaacgtggcggtggtgttcagtggctcggcctaccagcaggagatcaaggggcgtctc
agcagggagaacttcatggacctgcccttggaggtgaatcccatcacagtgctggtaaac
aacaccaaccctcgggccctgctcacacgcatctgtgacacactggcggccaaccgcgta
catggtgtggtgtttgaggacaacatcggctcggaagccgtggcacagatcctggacttc
attgccctgcagacggccgtgcccatcgtgggcatcagcgggggctccgccatggtcctg
ccacacaagggtgacggctccacgttcctccagctgggctcctccatcgagcagcagata
aacggcatgttcaaggtgatggaggagtacaactgggacagcttcgtggtcatcaccagc
ctgtacccgggctacgaggtctacgtggactatgtcaagaccttcactgacaccagctac
ttcatgtgggaactgcaggacgtgctgacctttgatatgtctgccgacggcatgaacgac
atccgggcacggcgcctgctgcagcagattgacgcccaggtactgctggtatactgctcc
cacgaggaggcccagtacctgttcagtatggccggagatgccggcctgctggggcctggc
tacatctggatcctccccagccttgccgtggggaacccagacatgcccccaccaaaaagc
ttccctgtgggcctcatcagcatcatcaccgaccgcnggcgaatgagcctgaggaagagg
gtgcgggatggggtggccatcgtggtcaaaggggtgcagagcttccgcaaacagaggggc
ttcatccccgagggccacaacgactgccacagccctgttaaggaatcttctaatgataca
cttttcaggcacatgttaaacgtaacatgggagcacaacgacttctcgttcaaccctgaa
gggtacctgatcaacccagctatggtcatcatcaccttagatcgagagagacagtgggat
aaggtggggaactatgagatggggatcctgcagatgagatacccggtgtggcctcgctac
ggcacctatctggagcccgtatcagataacagacacttgactgtggccacactggaggaa
cgtccctttgtcatagtggaggctgtcgaccccatgactgggacctgtgtcagcaacact
gtgccctgccgccgccagtccaacaagacagagactattgtaggtcatactgagccctac
accaaactgtgctgtaagggtttctgcatagacatcctgaagaagctgtcycgcaccacc
aaattctcatacgacctctacctggtcaccaacgggaagcacggcaagctggtcagaggc
agttggaacggcatgatcggagaggtggtatacaagcgggcggacatggccattggctcg
ctgaccataaacgaagagcgctcagaaattatcgacttctccgtgccgtttgtggagacg
gggatcagtgtgatggtcgccaggagcaacgggaccgtctcaccctctgcctttcttgag
ccctacagtccggcggtgtgggtgatgatgtttgtgatgtgcttaacggtggtagctgtc
acagtgtttatctttgagtactgcagccctgtggggtacaaccggagtctggtgagcgcc
aaggatcccggaggccccaccttcactattgggaagtctgtgtggctgctgtggggcatc
gtcttcaacaactctgttccaattgagaaccccaagggcaccaccagcaaggtcatggtt
ctggtatgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggcagcc
ttcatgatccaggagcaatacactgacacagtctctggactgagtgacaaaaagttccag
aagccacasgagcagtatccaccgtttcgttttggtacggtcccaaatggaagcacagag
aggaacatccggagcaactaccctgagatgcatgcccacatggtcaaatacaaccagaag
ggtgtggaggacgccctcaacagcctcaaatcagggaaactggatgccttcatctatgac
gctgctgtgctgaactacatggcaggtaaagacgagggctgtaagctggtgaccatcggc
agtgggaaggtctttgccaccactggctacggcatcgccttgcagaaggagtcccgatgg
aaacgtcctatagacctggccctgctccagttcctagctgatggtgacacacagaagctg
cagacggtgtggctcacagggatctgtcgtaacgagaagaaggaggtgatgagcagtaag
ctggacatagataacatggcgggcgtcttctacatgctactggtggccatggggctcagt
ctcctggtgttcagctgggaacatctgctctactggaagctgagacactcagtacgcaag
tctgaacgcctcgacttcctgctcgccatcagcaggggaatctacagctgcttcaatggc
gtggaggactctgaccgcaacggaaacctccagaatcctgacgtcaccaccaactacacc
caggccaacatgctgaagatgctgcagacagccaaggacatcgtgacctcgaccagagtg
gagaactccctggacaatgccaccaagaccatagagaactggagccggcgaggagccgac
aatgtgcgggttggcctgccgcctcgggtggcaaccactatagacatgggccacagccgc
ctgccatacatctccagcatcacggacaaccacttgccctacccccagagggcgctcgct
tccaccttccccatccactactcggacagcgccacccagcccctgctggacaaatctagg
gtggtgacgcggcctaccccgctccgctacacccttccggcccgtggcagccaccacttc
tacgagaggaccctacccatctccagcctcagcagcccccacatagccatgagggaccct
gctccccccagcacctccagtcacaacccacaccccmaccacagcagcaggctgtatgtt
gagagccagccccggcaccccacctccccgtttgtcccctacagagagttccaggtacct
gatatctatgtggaacaccacaagggtcccctgggacggaagttcagctacccccctgac
cacatgggcaggaagaagcggtcccacagctacgtgttttccgaggcccaagacaccagg
grgaggaacgactatgatgagccaacttcctgtctggctgagctgagggccaaccacctc
ctgaacaaccaggccccttctgcatcaaccatagcctgcatggggggccactaccccagc
ggcagcgccagctgcaactcctgcatgaagccctacctggagcctggaatggaggatgtg
cccttgctggggaaggacaaggtcaaccgccgggcctcttttctcaaggccacctggagc
agtgacaggatccgccagctgggcgagaagccctccacctccactatgcctgacctgttc
ccccgcgtagtggtagccaaccccaagccccacaagctgtacggcagccaggggaacaac
ctgtgctaccccctggccgctgagcctgcctacctagacccggctcatatgcgttcctac
ccctacaagcagcagaagctcaagtgctcccagtccacccggctaccatcctacagggag
gctatcctgcagaacgcagccgctttgcggcgctcctcctccaccgtggtgcacagacac
tactccacctacctgaactcctacacagacctgcctgtatacgtggggccgctgccccag
gggcccgggcagttctacgacaaggacatgtgccacttgttcccctgtgcaagccactgc
cctaacaacaatgccctkstgccccgtatgggggaccggcaggtrgtgtaccagaacaat
atgtttgggggctacgagggmgcggtgggkcggtcgcgggaggagccccccctgcccggg
tctgggagcagggatcggagggaggtcctggtggccagaagagtcaacagtccctatgtg
ccaaagacctggggcagggtatccagtctggagtctgaggtctga
DBGET
integrated database retrieval system
