Salvelinus sp. IW2-2015 (Arctic char): 112073787
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Entry
112073787 CDS
T05762
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
salp04150
mTOR signaling pathway
salp04210
Apoptosis
salp04217
Necroptosis
salp04350
TGF-beta signaling pathway
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04625
C-type lectin receptor signaling pathway
salp04920
Adipocytokine signaling pathway
salp05132
Salmonella infection
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112073787
04350 TGF-beta signaling pathway
112073787
04150 mTOR signaling pathway
112073787
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112073787
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112073787
04217 Necroptosis
112073787
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112073787
04621 NOD-like receptor signaling pathway
112073787
04622 RIG-I-like receptor signaling pathway
112073787
04625 C-type lectin receptor signaling pathway
112073787
09152 Endocrine system
04920 Adipocytokine signaling pathway
112073787
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112073787
09171 Infectious disease: bacterial
05132 Salmonella infection
112073787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
112073787
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
112073787
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
112073787
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Cytokines
112073787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
112073787
NCBI-ProteinID:
XP_023996791
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MEGDCSRVMVDVESGPVYPATTVTLVRDKSTPRRRLCGALLAIALCVSAALFITWHAKKQ
DHVEEVDGEYNSSGEYKTAVEWTVDEGQGFSQGGLKLNNNEIVIPQAGLYFVYSQVSFHV
SCKADPKHPNNQKMVHLSNTVERWSPSYGTEDNKKEQTLLSSVRTVCKKSSNSEESEGKR
YNAVYIGAVFRLEKGDTLWTVIETRLLPQLETGDGKNFFGVFAL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgattgcagcagagtgatggtagacgtggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggacaagtccacaccccggcggaggctgtgtggtgccctg
ctggccattgcactgtgtgtctcagctgcgcttttcattacctggcacgccaagaaacaa
gatcacgtcgaggaagttgatggtgaatacaacagcagtggagaatacaagaccgcagtg
gagtggacagtagacgaaggccagggattctcacaggggggtcttaaactcaacaacaac
gagattgtgatccctcaggcgggcctttacttcgtctacagccaggtctctttccacgtc
agctgcaaggccgaccccaagcaccctaacaaccagaagatggttcacctgagtaacacg
gtcgagcgctggtccccaagctacggcaccgaagacaacaagaaggaacagacgctgctc
agctctgtacgcaccgtgtgtaagaagtcttccaacagcgaggagagcgaaggaaagcgg
tataacgccgtgtacatcggagcagtgttcagactggagaagggagacacgctctggaca
gtcatagagaccaggcttctgccccaactggagacgggtgatgggaagaacttttttggc
gtgttcgccttgtga
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