Salvelinus sp. IW2-2015 (Arctic char): 112076775
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Entry
112076775 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03020
RNA polymerase
salp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112076775
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112076775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112076775
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112076775
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112076775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
DUF3654
Motif
Other DBs
NCBI-GeneID:
112076775
NCBI-ProteinID:
XP_023999218
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MTFTFPDRGGQAEALVLMGIFQGTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFHVGYF
KAIIGILQMICKTCSHIMLTKEEKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTMCLN
CSTLNGPVKKCGLLKILTEKYKTTKKVVXTVVSDFLNSFDIAIEXNKEVEGLLNRAQKLS
PLVVLNLFRRIHEEDIPCSVMNPEAGKPADLISHRLLVXPLCIRPSVISDLSQGTTRMTH
MKLTEIIFLNDSSRRSNRCARAKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTR
GFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKA
NLEMLRKLVRSGPEDHPGANFIQQRHTQMK
NT seq
1172 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccttcccagacagaggaggccaggctgaagccctggtgctgatggggata
ttccagggcaccagtgagaaggatcgtccatgtgagacgtgtgggaagaacctggcagac
tgtctgggacactatggatatctggacctggagatgccctgttttcacgtgggctatttc
aaagccatcattggaatcctacagatgatctgtaagacgtgttctcacatcatgttgacc
aaagaggagaaactacagtttatggatgtgttgaagaggccaggcctagcgtacctccag
aaacgaggaatgaagaagaagatatccgacaaatgccgcaaaaggacaatgtgtctcaat
tgctccacgttaaatggaccagtgaagaagtgtggcttgctaaagatcctcactgagaaa
tacaagacaaccaagaaagtggtgngcactgtagtatcagactttctcaactcattcgat
atcgcaatagaancaaacaaagaagtggagggcttgcttaacagggctcagaaactgagt
cctctggtggtgttgaacctgttcaggaggattcacgaggaggacattccctgctccgtg
atgaaccctgaggcaggtaagcctgcagacctcatctctcaccgtctgctggtancccca
ctctgcatccgcccctctgtcatctcagacctcagtcaaggtactacgaggatgacccac
atgaagctcacagagatcatcttcctcaatgactcatcaagaagatcaaaccgttgtgcg
agggccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctc
tacatcaacagtgagctctctggcatccccctcaacatggcccctaagaagtggaccaga
ggcttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaag
agagtggacttctctgggagaackgtcatctctccggaccccaacctgcggattgatgag
gtggctgtccctgtgcacgtrgccaaaatcctgacctacccagagaaggtgaacaaggcc
aacttggagatgctgaggaagctggtgcgtagcggtcctgaggaccaccctggagccaac
ttcatccagcaacgtcacacgcagatgaagag
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