Salinivibrio sp. YCSC6: E8E00_00325
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Entry
E8E00_00325 CDS
T05946
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly03030
DNA replication
saly03410
Base excision repair
saly03420
Nucleotide excision repair
saly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E8E00_00325 (polA)
03410 Base excision repair
E8E00_00325 (polA)
03420 Nucleotide excision repair
E8E00_00325 (polA)
03440 Homologous recombination
E8E00_00325 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saly03032
]
E8E00_00325 (polA)
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_00325 (polA)
Enzymes [BR:
saly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E8E00_00325 (polA)
DNA replication proteins [BR:
saly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E8E00_00325 (polA)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E8E00_00325 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E8E00_00325 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DUF5997
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QCF34754
LinkDB
All DBs
Position
I:70853..73603
Genome browser
AA seq
916 aa
AA seq
DB search
MATLPDNPLILVDGSSYLYRAYHASPNLTNSQGEPTGAVFGVVNMLRSLLRQFPHSHVAV
IFDAKGKTFRDDMYEQYKANRPPMPDDLRGQIEPLHKIIKAMGLPLLAVEGVEADDVIGT
LATQASKAGMPVLISTGDKDMAQLVDEHVTLINTMTNVVMDPEAVREKYGFGPEHIIDYL
ALMGDKVDNIPGVPGVGDKTATALIANLGGLDDIYANLDKIAALSFRGAKSMAKKLTEHQ
DAAYLSYQLATIKLDVELDFTPEQLVKQEPDNDTLVAMYRDLQFRRWLKELDEGDAPEEA
VSDEPISQAATIDRSGYQTLLTRDALDTWLKKIRDAEVVAVDTETDSLNYMEANLVGISF
AVAPGEAAYVPVAHDYLEAPAQLSLDEVLEVLRPWLEDPSAAKVGQNLKYDASVFARHGI
TLKGIAYDTMLESYVYNSVAGRHDMDSLAERYLQHTCISFEEIAGKGKKQLTFNQIPLEQ
AAPYAAEDADITLRLHQYLIGKVTSDEKLKTIFEFYEMPLVSVLSRMERHGVLIDKDKLA
TQSEALHTRLIELEREAFEIAGEEFNLSSPKQLQAILFEKMGLPVVKKTPSGSPSTNEEV
LQELSLDYPLPARILEYRGLAKLKSTYTDKLPRMINAQTGRVHTSYHQAVTATGRLSSTD
PNLQNIPIRNEQGRRIREAFTAEPDHTILAVDYSQIELRIMAHLSGDKALLEAFRDGKDI
HAATAAEVMGVSLDEVTSEQRRRAKAINFGLIYGMSAFGLSRQLGIGRQEAQSYMDTYFE
RYPGVKAYMDRTREQAAEKGYVETIFGRRLYLPEIKSRNGMRRKGAERAAINAPMQGTAA
DIIKRAMILVDQWIQANAADDARLVMQVHDELVLEVKTSSLSKVESEVRKLMESAADLDV
PLIAESGHGNNWGEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttcccgacaatccgttaatcctcgtggatggctcttcgtacctttaccgg
gcataccatgcttctcctaatctcaccaatagccaaggtgaacccaccggggctgtattt
ggggtggtgaacatgctgcgtagtttgttgcgacaatttccccattcacatgtggcggtg
atttttgatgccaaagggaagacgtttcgtgacgatatgtacgagcagtacaaagccaac
cgtccacccatgccagatgacctacgcgggcaaattgaacctttgcataagattattaaa
gccatgggtctgcctttactcgcggtagaaggggtggaggccgatgatgtgattggcaca
ctcgctactcaagcctcaaaagcgggaatgccggtcctgatcagcacgggtgataaagac
atggcgcagctggtggatgagcatgtcaccttaatcaacaccatgactaatgtggtgatg
gatcctgaggcggtgcgtgagaagtatggctttggtcctgagcatattattgattacctt
gccctgatgggcgacaaagtcgataacattcctggcgtaccgggtgtgggagataaaacc
gcgaccgcgttgattgccaatctaggtggcttggatgatatctacgcgaacctcgataag
attgcagcgctcagcttccgcggcgcgaaaagcatggcgaaaaaactgactgagcatcaa
gacgccgcttacctgtcttatcagctcgccacgattaaattggatgttgaactggatttc
acccctgaacagctggtcaagcaagagcctgataatgacaccttggtggccatgtatcgt
gacttgcaattccgccgctggctcaaagagctggatgaaggcgatgcgccggaagaggcg
gtgtctgatgaacctatctcgcaagcggccacgattgaccgcagtggctaccagaccctt
ctgacacgcgacgcactggacacttggctgaagaaaattcgtgacgctgaggtggttgcg
gtcgatacggaaaccgatagcctcaactatatggaagccaatctggttggtatttcattt
gccgtcgcgccgggcgaagcggcgtatgtaccggtagcgcatgattatctggaagcgccg
gctcaattatcgctggatgaggtgctggaggtgttgcgtccttggttggaagatccctca
gcggcgaaagtcggccagaatctgaaatatgatgccagtgtgtttgcgcgtcacgggatc
accttaaaagggattgcctatgacaccatgctggaatcgtacgtctataacagtgtggca
ggacgccatgacatggacagcctagctgagcgctacttgcagcacacctgcatcagtttt
gaagagattgctgggaaaggcaagaaacaactgacctttaaccaaatccctcttgagcaa
gcggcaccttatgcggcggaagatgccgacattacgttgcgtttgcaccaatatctgatt
ggtaaagtcaccagtgacgagaaactgaaaaccatctttgagttctatgagatgccacta
gtcagcgtgttgtcgcgtatggaacgtcatggtgtgctaattgacaaagacaagttggcg
acccaatcagaagcgttgcatactcgtttgattgagcttgagcgtgaagcgtttgagatt
gccggcgaagagttcaacttaagctcgcccaagcagctacaagcgattttgtttgagaaa
atgggcctgccggtagtaaagaaaaccccatcaggtagcccttcaaccaatgaagaagtg
ctgcaagagctctcactcgattacccgctgccagcgcggattttggaataccgtgggctg
gcaaagctcaaatcgacctacacggacaaattgccgcgcatgatcaatgcgcaaaccggc
cgtgtgcacacctcgtatcatcaagccgtcaccgcgacggggcgcttatcgtccaccgat
ccgaacttacaaaatatccccattcgtaacgaacagggtcgtcgtattcgtgaagccttc
accgcggaaccggatcataccattttggcggtcgattactcgcaaatcgaattgcggatt
atggcgcacctatccggtgataaagccttgctagaagcgttccgtgacggcaaagatatt
cacgccgccaccgcagcggaagtgatgggggtaagcctcgacgaggtcaccagcgagcag
cgacgccgcgctaaagcgatcaactttggtctgatttatggcatgagtgcttttggtctg
tcccgtcagttagggattggtcgtcaagaagcacaaagctacatggatacctactttgag
cgctacccaggcgtaaaggcctacatggaccgcacccgtgagcaagcggcggaaaaaggc
tatgtagaaaccattttcggtcgtcgtctctatttgccggaaattaaatcgcgtaatggc
atgcgtcgtaaaggggccgagcgcgcggcaatcaatgcgccgatgcaaggaacggcggcc
gatattattaagcgtgcgatgatactggttgatcaatggattcaagccaatgccgcggat
gacgcccgtctggtaatgcaagttcacgatgaactggtactggaagttaaaacgtcatct
ttatccaaagttgaaagtgaagtacggaaactgatggagtcggcagcggacttggacgtg
ccgctgattgccgagtctggacacggtaataactggggtgaagcccactaa
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