Sphingobium amiense: SAMIE_1000610
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Entry
SAMIE_1000610 CDS
T06684
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
sami
Sphingobium amiense
Pathway
sami00906
Carotenoid biosynthesis
sami01100
Metabolic pathways
sami01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SAMIE_1000610
Enzymes [BR:
sami01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
SAMIE_1000610
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
FAD_oxidored
NAD_binding_8
FAD_binding_2
Thi4
NAD_binding_9
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
BBD96560
UniProt:
A0A494W7H5
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Position
62126..63298
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AA seq
390 aa
AA seq
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MARRFPYQREMDMEHDLVIVGGGLAGGLIALAFAALRPEVRLLLVEAGERPGGNHIWSFF
DGDVAREHRWLVDPLVAHRWPQGHEVRFPGHGRRLDTPYNSVTSVHFAVALERALGDRLL
TQAPVSGVTSRAVTLADGRAIGAKAVIDARGAGDLSALRCGWQKFVGHALRCEAPHGIDR
PVIMDATVEQIDGYRFVYLLPWDERTLFVEDTYYSDTPDLDVAAIDARIAAYAAGQGWRH
EVVHREEGVLPVVHGGDFDRYWPKDDPVARAGVRAGLFQPMTGYSLPDAVRFAMWVVDQP
LNDLPRATRAYAKAHWRRGGYYRMLGRMLFGAALPDRRWRIFERFYRLDPALIQRFYAGR
STLTDRLRILCGKPPVPIRSAMRTLLNPPA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgccgcttcccctaccagcgtgaaatggacatggagcacgacctcgtcatcgtg
ggcggcgggctggcgggcgggctgatcgcgctggcgttcgcggcgctgcggcccgaggtc
cggctgctgctggtcgaggcgggggaacggcccggaggcaaccatatctggtccttcttc
gatggcgatgtggcgcgcgagcatcgctggctggtcgatccgctggtggcgcaccgctgg
ccgcaggggcatgaagtgcgctttccgggccatggccgccgactcgacaccccttataac
agcgtgacatctgtccacttcgctgtcgcacttgaacgggcgctgggcgaccggctgctg
acccaggcgccggtcagcggggtcacgtcccgtgctgtgactctggccgatggccgcgcg
atcggggcgaaggctgtcatcgacgcgcggggggcgggcgacctgagcgcgctgcgctgc
ggctggcagaagttcgtcggccatgccctgcgctgcgaagcgccccacggcatcgaccgc
cccgtcatcatggatgcgaccgtggagcagatcgacggataccgcttcgtctacctcctc
ccatgggacgagcggaccctgttcgtcgaggatacctattatagcgacacgcccgatctc
gacgtcgcggccatcgacgcacgtatcgccgcctacgccgccggtcagggctggcggcat
gaggtggtgcatcgcgaggaaggggttttgccggtcgttcatggcggcgatttcgaccgc
tactggccaaaggacgaccccgtggcccgggcgggcgtgcgcgccgggctgttccagccg
atgaccggctattccctgcccgacgccgtccgcttcgccatgtgggtcgtcgatcagccg
ctcaatgacctgccccgcgcgacgcgcgcctatgcgaaagcgcactggcggcggggcggc
tattaccggatgctgggcaggatgctgttcggcgcagcgctccccgaccggcgctggcgc
atcttcgagcgcttctaccgactcgacccggcgctgatccagcgtttctatgccgggcgt
tcgaccctgactgaccgtttgcgcatcttgtgcggcaagcccccggtccccataaggagc
gccatgcgcacattgttgaacccgcccgcctga
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