Sinocyclocheilus anshuiensis: 107665858
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Entry
107665858 CDS
T04917
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03020
RNA polymerase
sanh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107665858
09124 Replication and repair
03420 Nucleotide excision repair
107665858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107665858
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107665858
Enzymes [BR:
sanh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107665858
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107665858
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107665858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
107665858
NCBI-ProteinID:
XP_016312401
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MHGPPSSDSACPLRLIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFITKIMKVLRCVCFFCSKLLVDAN
NPKIKDILVKSKGQPRKRLTHVYDLCKGKNICEGGEEMDNKFGVEQQETEEDLTKEKGHG
GCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDMILGMDPKY
ARPEWMIVTVLPVPPLAVRPAVIMQGSARNQVSNSQYPGAKYIIRDNGDRIDLRFHPKPS
DLHLQIGYKVERHMCDGDIIVFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADF
DGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLE
RGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINAIRTHSTHPDEEDSG
PYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDITRLFYSNIQTVV
NNWLLIEGHSIGIGDSIADKATYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQT
FENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINISQVIAVVGQQNVEGK
RIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAE
TGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEAVEFQNMATLKPSNKAF
DKKFKFDYTNERALRRTLQEDVVKDVMTNAHVQSSLEREFEKMKEDREILRAIFPTGDSK
VVLPCNLARMIWNAQKIFRINPRTPTDLNPVRVVEGVCDLSKKLVIVNGEDQLSRQAQEN
ATLLFNIHLRSTLCSKRMTEEFRLSTEAFEWLLGEIETKFNQSIAHPGEMVGALAAQSLG
EPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVFLLGQAARDAERAKD
ILCRLEHTTLRKVTANTAIYYDPNPQNTVVTEDQEWVNVYYEMPDFDVTRISPWLLRIEL
DRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKFQEDEEVV
DKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEEGEFKALQEWIL
ETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYR
HLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEASSHGECDPMKGVSE
NIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMFFGSAPSPMSGMSPA
MTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPG
PASPYIPSPGALSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTPPSYSPSSPSFSPASPKSTPTSPSYSPSSPEYTP
TSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPT
YSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccttccagcgacagcgcatgcccattgcgcctcatcaagagagtgcaa
ttcggcgtcctcagccctgatgaacttaaacggatgtccgttactgaagggggcatcaag
taccctgagaccacagaaggagggcgccctaaactggggggacttatggacccccggcaa
ggggtaattgagagatcgggcagatgccagacgtgtgcaggtaacatgactgagtgccct
ggtcatttcggtcacattgagctggcaaagccagtctttcatgttggcttcatcacaaag
atcatgaaggtcctccgctgtgtctgtttcttctgttcgaaactgcttgtggacgcgaac
aatccaaaaatcaaagacatcttggtcaagtcgaaggggcagccacgtaagcgtctgacc
cacgtctatgacctctgtaaaggcaaaaacatttgtgagggtggagaggagatggacaac
aaatttggtgtggagcagcaggagacggaagaagacctcaccaaagagaagggtcatgga
ggctgtggcaggtaccagccacgtatccgtcgctctggcctggagctgtatgctgagtgg
aagcatgtgaatgaagactcgcaggagaagaagattcttctcagtcctgaacgtgtgcat
gagatcttcaaacgcatttcagatgaagaggacatgatcttgggcatggaccccaaatac
gcccgtcctgagtggatgattgtcacagtgttgcctgtgccccctcttgctgtgagaccg
gctgtgatcatgcagggctctgcaagaaaccaggttagtaacagtcagtaccctggagcc
aaatatatcatccgagacaacggggacagaattgacctgcgattccaccctaagccaagt
gaccttcaccttcagattggatacaaagttgaaagacacatgtgtgatggagacattatt
gtgttcaacagacagcctacactgcacaaaatgtctatgatgggccacagagtgcgaatc
ttgccatggtcaacatttcgactcaaccttagtgtgacaaccccatacaatgctgacttt
gacggcgatgagatgaacctgcacttgccacagtctctggagacccgtgctgagatccag
gagctggccatggtgcctcgtatgatcgtcacaccacagtccaacagacccgtcatgggt
attgtgcaggacaccctgacagctgtgcgcaagtttaccaagagagacgtcttcttagag
aggggtgaggtgatgaacctcctcatgtttctctccacatgggatggcaaagtgccccaa
ccggctatcttgaagcctcgacctctctggactggcaaacagatcttcagcctgatcatc
cctgggcacatcaatgccatccgcacacacagcactcaccctgatgaagaggacagcggc
ccttataaacacatctcccctggagacactaaggtgattgtggagaacggtgagttgatc
atggggatcctgtgtaagaagtcattgggaacctcagctggctctcttgtccacatctca
taccttgagatgggccatgacatcacacgactcttctattccaatatccagactgttgtc
aacaactggctgctcattgagggtcactctattggtattggtgactccattgccgataag
gcgacatatcaggacattcagaacacgattaagaaagccaaacaagatgtgatagaggtc
attgagaaagcccacaacaatgagttggagcccaccccaggtaacactctgagacagacc
tttgagaaccaggtcaaccgcatcctgaatgatgctcgagacaagactggatcctctgcc
cagaagtcattgtctgagtacaacaatttcaaatccatggtggtggctggttcaaaaggc
tctaaaattaacatttctcaggttattgctgtggtggggcagcagaacgttgagggtaag
cgaatccccttcggtttcaagcaccgcactctccctcacttcattaaggatgactatggt
ccagagagtagaggcttcgtggaaaactcttatctggccggtctcacaccaactgagttt
ttctttcacgccatgggaggcagagagggtctgatcgacacagctgtcaaaactgctgag
acaggttatattcagcgtcgtctgatcaagtctatggagtctgttatggtaaagtatgat
gctacagtcagaaactccattaaccaagttgtccagctgaggtatggagaggatggtctg
gcaggagaggctgtcgagttccaaaacatggctaccctcaagccatccaacaaagccttt
gataagaagttcaagtttgactacaccaatgaacgagctctccgccgcactctacaggaa
gatgtggtgaaagatgtgatgaccaatgcccacgtccagagttccctagagagagagttt
gagaagatgaaggaagaccgagagatcttgagggctattttccccacaggagacagcaag
gtggtactaccgtgcaatttggccagaatgatctggaatgctcagaagattttccgcatc
aatcctcgaacaccaactgacctcaacccagtacgagttgtggaaggagtttgtgacttg
agtaagaagctggtgattgtaaatggtgaagaccagttaagcaggcaagcccaggagaat
gccaccctgctcttcaacatccacctgcgctccaccctgtgctcaaagcgaatgactgag
gagttccgtcttagcacagaggcttttgaatggctgctgggagagatagagaccaaattt
aaccagtccattgctcaccctggtgagatggtaggtgctctggctgcccagtctctggga
gagcctgctactcagatgaccctgaatacattccactacgccggtgtgtccgccaaaaat
gtcactctcggtgtgcctcgactcaaagagcttatcaacatctccaagcgacccaagacc
ccctccttgaccgtctttctcctgggccaagcggcccgtgatgcagagagggccaaagat
atcctgtgtcggttggagcacacaaccctgcgcaaggtcactgccaacacagccatttat
tacgaccccaacccacagaacactgtggtgactgaggatcaggagtgggtcaatgtgtac
tatgagatgcctgacttcgacgtgacccgcatttcaccctggctgctgcgtatcgaactt
gaccgcaaacacatgactgaccgtaagctgactatggagcagattgcagagaagatcaat
gcaggatttggtgatgaccttaactgcatcttcaatgatgacaatgctgagaaactggtt
ttgcgaatccgcattatgaacagtgacgagaacaagtttcaagaggatgaggaggtagtg
gataagatggatgacgatgtcttccttcgctgcattgaatccaacatgctgacagacatg
acactgcaaggcattgaacagatcagcaaggtgtacatgcatctaccacagactgacaac
aagaagaaaatcatcattacagaagagggagagtttaaagccttgcaagagtggatcctg
gaaactgatggagtcagtcttatgagggtcctcagtgagaaggacgtggaccctgtcaga
accacctccaatgacattgtggagattttcactgttcttggtattgaggctgtgcgtaag
gctctggaaagagagttgtaccacgtcatctctttcgacggttcttacgttaactaccgc
catcttgccttgctgtgtgacacaatgacctgcaggggtcacttgatggccatcactcgt
catggtatcaacaggcaggacactggaccgctgatgaagtgctcttttgaagagacggtg
gatgtgttgatggaagcctcatctcatggtgaatgtgacccaatgaaaggagtgtctgag
aatatcatgctgggacagctggctcctgcaggcactggttgctttgacctgctgttggat
gctgagaagtgcaagtatggcatggagattcccactaatatccctggtatcagtgtcgca
ggacccacgggtatgttctttggctctgcccccagccccatgagtggaatgtctcctgcc
atgactccctggaacacaggagccactcctgcatatggtgcctggtctcccagtgttgga
agtggaatgacaccaggtgctgcaggcttctctcccagcgctgcatctgatgccagcggc
ttctcgcctggctattctcctgcctggtctcctactcctggttctcctggatcccctgga
ccagctagcccttatatcccctcaccaggagccttgtctccaaattactccccaacttct
cctgcctacgagcctcgttctcctggtggatacaccccgcagagccctggttactctccg
acttctccatcatactctccaacttcgccatcttattctcccaccagtccaaactacagc
cccacatctccgtcctactcgcccacatcaccctcctactctccaacttcgccatcttat
tctccaacatctccaagctactctccgacttcaccgtcttactctccgacttcaccgtct
tactccccgacttcaccgtcttactcgccaacatcccccagctatagcccaacgtccccc
agctacagcccaacctcaccgagttacagccccacgtctccatcttattccccaacttct
ccatcttattccccgacccccccgtcttacagcccaagctctccatccttctcccccgcc
tctccaaaatccactcccacctccccctcctacagtcccagctctcccgaatatacccca
acatcccccaaatattcccccacttccccgaagtactcgcccacttcgcccaaatacagt
cccacttctccaacctactccccaactacgcccaagtacagccccacttcccctacttat
tctccaacttctcctacctacaccccaaccagccccaaatattcccccacctctccgact
tactctccaacttctcccaaatactcacccacttcccctacctattctccaactagtcca
aagggctcgacctacagccccacttctcctggctacagccccacctctccaacctacagc
ccagccatcagccctgacgacagcgatgaagaaaataattaa
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integrated database retrieval system
