Sinocyclocheilus anshuiensis: 107668570
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Entry
107668570 CDS
T04917
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107668570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107668570
Enzymes [BR:
sanh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
107668570
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107668570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_16
CbiA
TniB
AAA_22
AAA_18
Motif
Other DBs
NCBI-GeneID:
107668570
NCBI-ProteinID:
XP_016315990
UniProt:
A0A671MSL9
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MTAEAPEKSAEEGLSSSGSAGTSGTRFDLERETELRFEVEAGERVQLELLSGLAEVFGSE
LNRNKKYTFGPGSKIAVFTWQGCSVSLSGKTEVAYISKDTPMLLYLNTHVALEQMRRQAE
KDNERGPRVMVVGPTDVGKSTVCRVLLNYAVRLGRRPTLVELDVGQSSVSVPGTMSALCI
ERPADVEEGFSVQAPLVFHFGSTTPGTNIKLYNKLTSSFAEVFSQRCEVNRKASVGGCII
NTCGWVKGSGYQALVHCASAFQVDVVLVLDQERLYNELKRDLPHFVRVVLLPKSGGVVER
SKDCRRETRDEKIREYFYGFRATSFYPHAFDVRFSEVRIYKIGAPSIPDSCLPLGMSQDD
TQLKLVPVSPGRDLTHHVLSVSSVDDDAEVGAGQSRGILESPVCGFIVVTAVDTQAQVMT
VLSPAPRPLPRHTLLIMDIRFIDLK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagaagccccagaaaagtcagcggaggagggcctgagttcgtcaggcagtgct
gggacttcaggtacacgatttgatctggagagagagacagaactgcgttttgaggtcgaa
gcaggagagcgagtacagctcgagctgttgtccggtctggcagaggtgtttggatccgaa
ctgaaccggaataagaagtacacattcggaccaggctctaagattgctgttttcacctgg
caaggctgcagtgtgtcgctttcaggcaagacggaggtggcttatatctccaaagataca
cccatgctgctgtatctcaacacccatgtagctctagagcagatgagacgtcaggccgag
aaagacaacgagagaggccctcgagtaatggttgtcggaccaactgatgtgggaaagtca
acagtatgtcgagtgttgctgaactatgctgtgcgactgggacgaagacctacacttgta
gaactggatgtcggtcagagcagcgtctctgtgcctggaactatgtcagctctgtgcatt
gagcgtcctgctgatgtagaagaaggcttctccgtgcaggctccacttgtatttcacttt
ggctctaccacaccaggaacaaacatcaaactttacaacaagctgacttcaagctttgca
gaagtattttcccagcgctgtgaggtgaaccgcaaggctagtgtgggtggctgtataatc
aacacctgcggctgggtcaaaggttcaggctaccaggctctggtccactgcgcttcagct
ttccaggtggatgttgtgctagtcctggaccaggagcgtctctataatgagcttaaacgt
gacctgccacactttgtacgtgtcgtccttctgccaaagtccggcggcgtggtggagcgc
tctaaggactgccgacgagagacacgggatgaaaagatccgggaatacttctacggcttt
cgtgcaacttccttttaccctcatgcctttgatgtgcgtttttcagaagtgcgtatttac
aagatcggtgcaccctcaattccagactcctgtctccctctgggtatgtcccaggacgac
acccagctcaaactcgtcccagtcagccctggcagggatttaacccaccatgtgctgagt
gtgagttcggtggatgatgatgccgaggtgggtgcgggacagagcagagggattctagag
agtcccgtgtgtggcttcatagttgtgacagcggtggacacacaagctcaggtgatgacg
gtactctcaccagcacccagaccactgccgcgacacactctgctcatcatggacattcgt
tttatcgaccttaaatga
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