Scedosporium apiospermum: SAPIO_CDS8564
Help
Entry
SAPIO_CDS8564 CDS
T06367
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sapo
Scedosporium apiospermum
Pathway
sapo03020
RNA polymerase
sapo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sapo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAPIO_CDS8564
09124 Replication and repair
03420 Nucleotide excision repair
SAPIO_CDS8564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sapo03021
]
SAPIO_CDS8564
03400 DNA repair and recombination proteins [BR:
sapo03400
]
SAPIO_CDS8564
Enzymes [BR:
sapo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAPIO_CDS8564
Transcription machinery [BR:
sapo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SAPIO_CDS8564
DNA repair and recombination proteins [BR:
sapo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SAPIO_CDS8564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
27727636
NCBI-ProteinID:
XP_016640439
UniProt:
A0A084FZX8
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MADYEDGYDYDDYEEDLSITAEDCWAVIAAFFDNKGLASQQVDSFNEFTTSTVQHLVNEY
SRITLDQPSPPSHDGRTYAVRRYEIDFGHVMVSRPSITESDGREATLLPYECRDRNLTYA
SPMYIRITKKVTLAVERQVPLHEMDDEQRETYAQTKVEPTEIRWEDEDVDPEPVDGKTDD
QKNIVFVGRLPIMVKSEICHLSHETDENLFLLNECPYDQGGYFIINGSEKVLIAQERSAA
NIVQVFKKAQPSPYSYTAEIRSALERGSRLISQLALRLYTKGDKRLGGSGPYVRSTLPFV
KSDLPIAIVFRALGVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFVIQDREVALDYIGK
RGQSYMLSRERRIRAAKDLLQKETLPHISQSEGSETRKAFFLGYMVHKLLQCALGRRDVD
DRDHFGKKRLDLAGPLLAKLFRNIMRRINQELSSYMKMCIQQNKKFQTVNGVRSTTLTNG
LKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQLHN
THWGLVCPAETPEGQACGLVKNLSLMCFVSVGTPSDPIIEFMINRGMEVVEEYEPLRYPN
ATKVFVNGVWVGIHQDPKHLVNEMMETRRRSYLPNEVSLVRDIRDREFKVFSDAGRVMRP
VFVVNQEDNAQTGTQKGTLVLTKTHINNLASEETVPPPERQYGWDYLVNDGVIEYLDAEE
EETTMICMTPEALDEYRAQKAGIAIDNDISDDPNRRLKTKLNPTTHMFTHCEIHPSMILG
ICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYMRRMDTMANILYYPQKPLATTMAME
HLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGMFRSLFFRSYTDCEKKVGINL
VEQFEKPFRSETLRLKHGTYDKLDDDGIVAPGVRVSGEDIIIGKTSPLGKDTQELGQRTT
QHSKRDASTPLRSTENGIVDSVVMTTNQDGMRYVKVRVRTTKIPQIGDKFASRHGQKGTI
GVTYRQEDMPFTREGITPDIIINPHAIPSRMTIAHLIECLLSKVGALKGLEGDATPFTDV
TVDSVSALLREEGYQSRGFEIMYNGHTGKKLRAQVFFGPTYYQRLRHMVDDKIHARARGP
VQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFEVSDAFRVHICEICGLMT
PIANLSKQSFECRPCKNKTKIAQIHIPYAAKLLFQELQAMNIAARMFTDRSGVTIR
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacgaagatgggtacgactacgatgattacgaggaggacctcagcatcact
gctgaggattgttgggctgtcatcgcagcctttttcgacaacaaaggtcttgcttcccag
caagtagactcattcaatgagttcaccacatcgacggtacaacatctcgtcaatgagtac
tcccgcatcactctcgaccagccctccccgccgagccacgatggccgaacctatgccgta
cggaggtacgaaatcgactttggccatgtcatggtctctcgcccttccataaccgaatcc
gacggtcgtgaagccactcttcttccctacgaatgtcgcgatcgaaacctgacctacgcg
agtcccatgtacattcgaatcacgaagaaagtaaccttggctgttgagcgccaggtacct
ctccatgagatggatgatgagcagcgggagacgtacgctcagacgaaggtggagccgacc
gagatccgatgggaagacgaagatgtagaccccgagccagtggatggcaagaccgacgat
caaaagaacattgtcttcgttggcagacttcccatcatggtgaagtccgagatttgccat
ctgagccacgaaaccgatgaaaatctcttccttctgaacgagtgcccctacgaccaaggt
ggatatttcatcatcaacggaagtgagaaggtccttattgcacaagagcgctccgccgcc
aatatcgttcaggtattcaagaaggctcagccaagcccttacagttatacggcagaaatc
cgcagtgcactggagcgtggatcgcgactgatttctcaactcgccctgcgcctttacaca
aaaggagacaagcgtctcggaggctctggaccgtacgtgcgatcgactctaccgttcgtc
aagagtgatttgcccattgccatcgtgttccgggccctcggtgttgtctccgacgaggat
attttgaaccatatttgttacgaccgaaacgacagtcagatgctggaaatgcttcggcct
tgtatcgaagaggccttcgttatccaggaccgtgaggtggcgcttgattacatcgggaag
cgtggtcaaagctacatgctcagccgagagcgccgaatcagggcggctaaggatttgttg
cagaaggagactctccctcacatctcacaatccgaaggtagcgagactaggaaggcgttc
ttcctaggctacatggttcacaagctcctccaatgcgcgctcggccgcagagatgtggac
gaccgtgatcactttggcaagaagcgcctggaccttgccggtcctttgctggctaagctg
ttccgcaacatcatgcgtcgcatcaaccaggagttgtcgtcgtacatgaagatgtgtatt
cagcaaaacaagaagttccagactgtcaatggcgtccgctcaacgacgcttacgaacgga
ttgaagtactcgctcgcaacgggcaactggggtgatcagaagaaggcgatgagctctaca
gccggtgtctcccaggtgttgaatcgttacactttcgcctctaccctctcgcatttgcgt
cgcacaaacactcccattggacgagatggaaagttggccaagcctcgccagcttcacaac
acacattggggcttggtatgccctgcagagacgcccgaaggacaggcttgtggtctcgtc
aagaacctttcgctcatgtgtttcgtcagtgtgggtacgccttccgacccaattattgag
ttcatgatcaaccgtggtatggaagtggtggaagagtacgagcctctcaggtatcccaac
gccaccaaggtctttgtaaacggtgtctgggtcggtattcaccaagaccccaagcacttg
gtcaatgagatgatggagacccgtcggcggtcatacctcccgaacgaggtctccctggtt
agagatatccgcgatcgagaattcaaagtcttctccgatgccggccgtgttatgcgtcca
gtgttcgttgttaaccaagaggacaatgcgcagacgggtacccagaagggaactctggtg
ctgaccaagacacacatcaacaacttggcctcggaggagaccgtgcctccgccagagcga
caatatggctgggactacctcgtgaacgacggtgtaattgagtatctggatgccgaagag
gaggagactacgatgatttgtatgactcctgaggcgttggatgagtatcgtgctcagaag
gctggtatcgccatcgataatgatatttccgacgatccaaaccggcgtttgaagacgaag
ttgaacccgacaacacacatgttcactcattgcgaaatccacccgagtatgatcttgggc
atctgcgctagcattattcctttccccgatcacaaccaatccccgcgtaacacttaccag
tcagccatgggtaagcaagcgatgggcttcttcctcacaaactacatgcgcaggatggat
acaatggcgaacatcctctactatcctcaaaagcctctggccacaacaatggcgatggag
catctcaagttccgagagctgccagccgggcaaaacgccattgtcgccattgcatgctac
tccggttacaaccaagaagactctgtcattatgaatcagagcagtatcgatcgcggtatg
tttagaagtttgttcttccgatcatacaccgattgcgagaagaaggttggtatcaatctc
gtggagcaattcgagaaaccgttcaggagcgagaccctacggctcaagcatggcacctat
gacaaactcgacgatgacggtatcgtagcccccggcgtccgtgtgtcaggcgaagatatc
atcattggcaagacttcgcccctgggtaaggatacgcaggaactcggccagcgaacaacg
caacatagcaagagagatgcctcgacacctctgcgaagcacagagaacggtatcgtggac
tctgttgttatgacgacgaatcaggatggtatgcgctatgtcaaggtccgtgtcaggacg
acgaagattccgcagattggtgacaagttcgcctcgcgtcacggtcaaaaaggtacgatt
ggtgtgacgtacagacaagaggatatgccgtttacgcgtgagggaatcacccctgacatc
atcatcaacccgcacgccatcccttcgcgaatgactattgcccacttgatagaatgtctc
cttagtaaagtcggcgcactcaagggtctcgaaggtgatgcgactccttttacagacgtc
accgtcgactctgtttccgcccttctccgcgaagaagggtaccaatcccgtgggttcgaa
attatgtacaacggccataccggaaagaagcttcgagcccaggtgttcttcggccccact
tactaccagcgactcaggcacatggtggacgacaagatccacgcgcgagctcgtggaccg
gtgcagatcatgacgagacagcccgtggagggccgtgcgcgtgatggcggtcttcgattt
ggagagatggaacgtgattgtatgattgcgcacggcgcggcggccttcttgaaagagagg
ctgtttgaggtttcagatgccttccgtgtccacatttgcgagatctgcgggttgatgacg
cccattgcaaatctttccaagcaatcattcgagtgccggccatgcaagaacaagactaag
attgcgcagatccacatcccatatgccgccaagctgctgttccaggaactgcaagctatg
aatattgcggctaggatgtttaccgatcgatctggtgttacgattcgttga
DBGET
integrated database retrieval system
