Sorex araneus (European shrew): 101539173
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Entry
101539173 CDS
T07854
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sara03016
]
101539173 (CDKAL1)
Enzymes [BR:
sara01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101539173 (CDKAL1)
Transfer RNA biogenesis [BR:
sara03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101539173 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
101539173
NCBI-ProteinID:
XP_012789383
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MPSASCDKLLHDIEDIVTQEDSKPQDRHYARKQVVPKVRRRNQEKYTEEQDSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPSSHRFLP
SFRKAQEENKKIVLAGCVPQAQPRQDYLKGLSVIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPVEELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGSSLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDQDFQETVKLVEEYQFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPSFMGKMVEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLARGEVSGLPEQA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgcatcctgtgataaactcctgcacgacatagaagatatcgtgacacaagaa
gattccaagccacaagacagacattatgcaagaaagcaagttgttccaaaggtgcgaagg
cgcaaccaggagaagtacacggaagagcaggacagccctccaagtgacagcacaattcca
gggatacagaagatttggatccgaacctggggctgttctcataataattcggacggagag
tacatggccggccaactagctgcttatggatataaaataacagagaacgcatctgacgca
gacttatggcttctgaatagctgtacagtgaaaaacccgagttcacaccgtttccttcca
tctttcaggaaagcccaagaggagaacaagaagatcgtgctcgctggctgtgttcctcag
gcccagccccgccaggattacctgaagggactgagcgtcatcggggttcaacaaatagat
cgtgtggtagaagttgtggaagaaacaattaaaggtcactcggtgagactcctgggtcag
aagaaggataacggcaggcggctcgggggcgcacggctggatttgcccaagatcaggaag
aatccactgatagaaatcatttccatcaacactgggtgtctcaatgcttgcacctactgc
aaaaccaagcatgcccgaggaaacttggccagttacccagtcgaggagctcgtggataga
gccaagcagtctttccaagagggcgtttgtgagatatggctgaccagcgaagacacgggg
gcctacggcagagatattggcagcagtctccccgcgctgctctggaagctggtcgaagtg
atccccgagggagcgatgctcaggctgggcatgacaaacccaccctatatcctagagcac
ctggaggaaatggcgaagatccttaaccatccccgggtctacgcgttcctgcacatcccg
gtccagtccgcctctgactcggtgctcatggacatgaagagagagtactgcgtggccgac
ttcaagcgcgtggtggattttctgaaagagaaagttcctggaataacgattgctacagat
attatctgcggttttcctggagaaacggatcaagattttcaagaaacagtgaaactggtg
gaggagtaccagttcccaagcctcttcattaaccagttttacccaagaccaggaactccc
gccgcgaaaatggaacaagttccagcgcaagtgaaaaagcagcgaaccaaagatctttct
cgggtatttcattcttacaacccgtatgatcacaagatcggcgaaagacagcaagtatta
gtaacagaagaatcttttgattccaaattttacgttgcacataatcggttctacgaacag
gttttggtacccaagaacccttcattcatggggaaaatggtggaagtggacatttatgaa
tcaggaaaacattttatgaaaggacagccggtatccgacgccaaggtgtacacgccatcc
atcagcaaaccgttagccagaggtgaggtctccggcttacccgagcaggcctaa
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