Sorex araneus (European shrew): 101547135
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Entry
101547135 CDS
T07854
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04721
Synaptic vesicle cycle
sara04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101547135 (SLC6A4)
04721 Synaptic vesicle cycle
101547135 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sara02000
]
101547135 (SLC6A4)
Transporters [BR:
sara02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101547135 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101547135
NCBI-ProteinID:
XP_004605058
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLSSQKEPAVGTDGDDCQENGVLQKGVPGPGDKAESGQISNGYSAVPSPGAGDGVQ
HSAATATTALVAEAPAGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISVWKKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDRLPWTSCQNAWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILFILLLRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCVTSFISGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLAVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAIAVFWFYGLTQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSFICIPTYIMYRLITT
PGTLKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagactacgcccctaagttcccagaaggagccggcagtgggcacggatggagatgat
tgtcaggagaatggagtgctacagaagggtgtccctggccctggggacaaggcagagtcg
ggccaaatctccaacggttactcagcggttcccagcccgggtgcaggagacggtgttcag
cactctgccgccacggccaccactgccctagtggctgaggctccggctggcgagcgggag
acatggggcaagaaggtggatttcctcctctcggtcattggctatgctgtggacctgggc
aacgtctggcgctttccctacatctgttaccagaatggagggggtgccttcctcctccct
tacaccatcatggccatttttggaggaatccctctcttctacatggagcttgcgctgggc
cagtatcatcgaaacggctgcatttccgtgtggaagaaaatctgccccatcttcaaaggc
atcggctatgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccggctgccctggaccagctgc
cagaatgcctggaacacgggcaactgcaccaactacttctcagagggcaacatcacctgg
acgctgcactccacatcccccgcggaagaattttacacgcgccacgtcctgcagatccat
cggtctaaggggctccaagacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcacggtgatctacttcagcatctggaaaggcgtcaaaacttctggcaaggtg
gtatgggtgacggccacctttccttacatcatcctctttatcctgctgctgaggggcgcc
accctccctggggcctggcggggcgtcctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtgggtggacgcggctgctcagattttcttctctcttggtcctggc
ttcggggtcctcctggcttttgctagctacaacaaattcaacaacaactgctaccaagac
gcgttggtgaccagtgcagtgaactgcgtgacaagcttcatttccggatttgtcattttc
acggtgcttgggtacatggctgagatgaggaatgaagatgtatctgaagtggccaaagat
gcaggccccagcctcctcttcatcacctacgccgaggccatagccaacatgccagcatcc
accttcttcgccatcatcttcttcctaatgctgattacactgggtctggacagcacattt
gcaggcttggagggtgtcatcaccgctgtgctcgacgagttcccacacatctggtccaag
cgccgggagtggtttgtgcttgctgtggtcattacctgcttctttggatccctggtcacc
ctgacttttggtggcgcgtacgtggtgaagctgttggaggagtacgctacggggcccgcg
gtgctcaccgtcgtgctgatagaggccatcgctgtgttttggttctatggcctgactcag
ttctgcagtgatgtgaaggaaatgctgggcttcagccctggatggttctggaggatctgc
tgggttgccatcagccccctgtttctcctgttcatcatttgcagttttttgatgagccca
ccacagctacgacttttccagtataattaccctcactggagcatcattctcggctactgc
atagggacctcctctttcatctgcatccccacgtacataatgtaccggctaatcaccact
ccagggacactgaaggagcgtattattaaaagcatcactccagaaacaccaacagaaatt
ccctgtggggacatccgcctaaacgtcgtgtga
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