Sorex araneus (European shrew): 101549118
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Entry
101549118 CDS
T07854
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101549118 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101549118 (POLR1A)
Enzymes [BR:
sara01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101549118 (POLR1A)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101549118 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101549118
NCBI-ProteinID:
XP_004612149
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MLGSKNLPWRRLQGVSFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHLLTCPRAVIHLL
VCQLRVLEVGALHAVYELERILSRFLEENPDPTGSEIQEELEQRTAEIVQDNLLGPHGAH
VKNVCESRSKLIAYFWKTHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAIVHKKAGQDTE
PLGIEEAQMGKRGYLTPSTAREHLTAIWKNEGFFLSYLFSGLADVGMESKFNPSMFFLDF
LVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDIVLIRKLLALMAQEQELPQEVAECAPE
EEKDASVAMDRSFLGLLPGQSLPDKLYNIWIRLQSHVNIVFDSEMDKLMMEKFPGIRQIL
EKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELR
QAVINGPNVHPGASMVINEDGSRTALSAVDQTQREAVAKQLLTPATGAPKPQGTKIVCRH
VKNGDILLLNRQPTLHRPSIQAHQARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQS
ELGRAEAYILACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRGL
TDKVGRVKIFPPAILKPCPLWTGKQVVSTLLINIIPEDHLPLNLSGKAKISGKAWVQDTP
RPVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEVYGGQTSGRVLTCL
ARLFTAYLQLYRGFTLGVEDILVKPKADAERRRIVEESAGCGPRAVRAALNLPEAASCDE
VRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKVCMPLGLHRQFPDNNLQMMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIRP
PEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLYGE
DGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHSG
APLRRGAFLNYSQKVQAAVKAAGLEGANQNGRSPDTQQMLSMWYELDEHSRRKYQKRAAP
CPDPSLAVWRPDIYFASVSETFEKKMDDYSREWAAEAERSHRRPALSLDSLRTLLQLKWQ
RALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASASIKT
PMMSVPVFNTKKALKRAKSLKKQLTRVCLGEVLQKIDVQESFCVGEKQSKLRVYRLRFEF
LPHAYYQQEKCLRPEDILHFMETRFFKILMESIRKKNSKASAFRNVNTRRATQRDLDRDG
EAEQGRGEQDGEEEEGRIVDAEAEEGDADASDAKRKEKQQEEVDYESEEEEEKGGEEDEE
DRPEEGAAHLENTHKAPEQEQEQEQEEEAGASAEGDTPPEGPLSQQQRVARGREPQAAES
RVRAVLECHPFIHGYEFDTEQSLWCEVTLKLPLMKINFDMSSLVVSVAHNAVVYATKGIT
RCLLNETTNSRQEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRV
IEKEIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMMGAHDELRSPSACLVVGKVVKGGTGLFELKQPLT
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaatttgccctggcggcggctgcagggcgtttcctttgggatgtat
tcggccgaagagctcaagaaactaagcgtcaagtcaatcacaaatcctcggtacctggac
agcctgggcaacccgtcagcgaatggcctatatgacctggctctgggccctgcggactcc
aaggaggtgtgttccacctgcgtgcaggacttcagcaactgctccgggcacctgggtcac
atcgagctcccactcaccgtctacaatcccctgctcttcgacaaactctacctgctgctc
cggggctcttgcttaaactgtcacttgctgacctgcccccgagctgtgattcatctctta
gtctgtcagctgagagtcctggaagttggggccctgcacgccgtctatgagctggagaga
attctcagcaggtttctggaagaaaaccctgacccgactggatctgaaattcaggaggag
ttagagcagcggacagccgagattgtgcaggacaacctcctggggccccatggcgcacat
gtcaagaacgtttgtgagagcaggagcaaactcatcgcttacttctggaagacacacatg
actgccaagcggtgtccacactgcaagaccgggcggtcagttgtccgaaaggaacacaac
agcaaactgacaatcacataccccgccatagtgcacaagaaagctggccaggacacggag
ccactgggaattgaggaagcgcagatggggaagagagggtacttgactcccagcaccgcc
cgggagcatctcacggccatttggaagaatgaagggttctttctgagttacctgttttcg
ggactggcagatgttggcatggagtccaaattcaatcccagtatgttcttcctggatttc
ttggtggtgccaccctcaagataccgccctgttaatcgcctgggggaccagatgttcacc
aatggccagacggtgaacctgcaggcagtcatgaaggacattgttctcatccggaagctg
ctggcactgatggcccaggaacaggagctgccccaggaggtggcagaatgtgcccctgag
gaggagaaagatgcttccgttgccatggaccggtcctttctgggtttgctgcccggccag
tccctcccagacaaactttataacatttggattcgccttcagagccatgtcaatattgtg
tttgatagtgagatggacaaattgatgatggaaaaatttcctggtatcaggcagatctta
gagaagaaggaaggtttgttccgaaagcacatgatgggaaagcgtgtggactacgcggcc
cgctcggtcatctgcccagatatgtacatcaacaccaacgaaattggaatccccatggta
tttgccaccaaactgacctacccgcagccagtcaccccctggaacgtacaggaactgagg
caagcggtcatcaacggccctaacgtgcaccccggggcctccatggtcatcaacgaggac
ggcagccgcacggccctgagcgctgtggaccaaacccagcgggaggctgtcgccaaacag
ctcctgacgcccgccacaggggcaccaaagccccagggcaccaagattgtgtgccggcac
gtgaagaatggggacattctcttgctgaaccgccagcccaccctgcacagaccctccatc
caggcacaccaggcccgcatcctgcccgaagagaaagtcctgcggctccactatgccaac
tgcaaggcctacaacgcggacttcgatggcgacgagatgaatgctcacttcccccagagt
gagctgggccgggccgaagcttacatcctggcctgcacagaccagcagtaccttgtcccc
aaggacggtcagccattggcagggctgatccaggatcacatggtgtcgggtgcgaacatg
accatccgagggtgctttttcacccgggagcagtacatggagctggtgtaccgaggactc
accgacaaagtggggcgtgtgaaaatcttccctcctgccatcttgaagccctgtccactc
tggacaggaaagcaggtcgtgtccacgctgctcatcaacatcatcccggaggaccacctc
cccctgaacctgtctgggaaggcgaagatcagcgggaaggcctgggtgcaggacaccccg
cggcccgttcccggcttcaaccccgactccatgtgcgagtcccaggtgatcatcagggct
ggggagctgctctgcggggtgctggacaaggcgcactacggcagctccgcctacggcctg
gtgcactgctgctacgaggtctacgggggccagaccagcggccgcgtcctcacctgcctg
gcccggctcttcacggcctacctgcagctctacagaggcttcaccttgggtgtggaggac
attttagtgaagccgaaggcggatgctgagaggcgccggatcgttgaagagtctgctggc
tgcgggccccgggccgtcagggccgcgttaaacctgcccgaggctgcgtcatgtgatgag
gtccgagggaaatggcaggatgcccatctgggcaaagaccagcgagattttaacatgatt
gatctgaagttcaaggaggaagtgaaccattacagcaacgagattaacaaggtgtgcatg
cccctcggcctgcaccgacagttcccagacaacaacctgcagatgatggtacagtccgga
gccaaagggtccaccgtgaacaccatgcagatctcctgcctgctgggccagatcgagctg
gaaggccgcagacccccactcatggcatccggcaagtcactgccctgctttgagccttac
gagttcacccccagggcgggaggcttcgtcactggcaggttcctcacgggcatcagacct
ccggaattcttcttccactgcatggcaggacgagagggcctggtggacaccgccgtgaaa
accagccgctcgggctacctccagaggtgtatcatcaagcacctggagggcctggtggtc
cagtacgacctgtcagtccgggacagcgatggcagcgtggtgcagttcctgtacggggag
gatggcctggacatccccaagacgcaattcctgcaacccaagcagttccccttcctcgcc
agcaactatgaggtgatcatgaaatcgaagcatctgcatgaagttttgtccagagcggac
ccccagaaagccctgcgccatttcagagctattaagaagtggcaaagcaagcactccggc
gccccgctgaggagaggcgccttcctgaattactcccagaaagtgcaggctgcagtgaaa
gctgccggccttgagggtgcaaaccagaacggccgcagccctgacactcagcagatgctg
agtatgtggtatgagttagacgagcacagtcggaggaagtaccagaagcgggcagcacca
tgccccgaccccagcctggccgtctggcgcccggacatctactttgcatcagtgtcggag
acatttgagaagaagatggatgactacagtcgcgagtgggcggctgaagctgagcggagt
cacaggagaccagcactttctctcgacagcctcaggaccctgctgcagctgaagtggcag
cgtgcgctctgcgacccgggcgaggccgtggggctgctggcggcccagagcattggggag
ccctccacgcagatgaccctcaacaccttccacttcgcaggcagaggcgagatgaacgtc
accctgggcataccaaggttgcgggagattctcatggtggccagtgccagcatcaagacc
cccatgatgagcgtgccggtgttcaacaccaagaaagcactgaagagagcgaagagcctg
aagaagcagctcaccagggtgtgcttaggagaggtgctgcagaagattgacgtccaggag
tccttctgtgtcggggagaagcagagcaagttgcgggtgtaccggttgcggtttgagttc
ctgccccacgcgtattaccagcaggagaagtgcctgcggcccgaggacatcctgcacttc
atggagaccagattctttaaaatcctgatggaatccatcagaaagaagaatagcaaagcc
tcagcgttcagaaatgtaaacacgcgaagagccacccagcgggacctcgaccgggacggg
gaggcagagcagggcaggggagagcaggacggggaggaggaggagggccgcatcgtggac
gcagaagccgaggagggcgacgctgatgcctcagatgccaaacgcaaggagaagcagcag
gaggaggtggattacgagagcgaggaagaggaggagaaaggaggggaggaggacgaggag
gaccggccagaggaaggggctgcgcatttggaaaacacccacaaggccccagagcaggag
caagagcaggagcaggaggaggaagcaggcgccagcgccgagggagacacgccgcccgag
ggccccctgagccagcagcagagggtggcccgaggccgagagccccaggccgccgagagc
cgtgtgcgggccgtgctcgagtgccaccccttcatccacggctacgagttcgacacggag
cagagcctgtggtgcgaggtgacgttgaagctgcctctgatgaaaattaacttcgacatg
agctccctggtcgtgtccgtggcccacaatgccgtcgtctacgcaaccaagggcatcaca
cggtgtctcctgaacgagaccaccaacagccggcaggagaaggagctggtcttaaacacg
gaaggcatcaacctcccggagctgttcaagtacgccgaggtgctggatttgcgtcgcctc
tactccaacgacatccacgccatggccaacacctacggcatcgaggcggcgctgcgagtc
attgagaaggagatccgggacgtgtttgccgtgtatggcatcgcggtggatccccgccac
ctctccctggttgcggactacatgtgcttcgagggcgtgtacaagccgctgaaccgcttc
gggatccgctccaattcctccccgctgcagcagatgacgttcgagacgagcttccagttt
ctgaagcaggccaccatgatgggagcccacgacgagctgcggtccccctcagcctgcctc
gtggtcgggaaggtcgtcaagggtgggacaggcctgttcgagctcaagcagcccctgaca
tag
DBGET
integrated database retrieval system
