Sphingomonas aliaeris: H5J25_09350
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Entry
H5J25_09350 CDS
T07559
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari00190
Oxidative phosphorylation
sari03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
H5J25_09350
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H5J25_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sari03019
]
H5J25_09350
Enzymes [BR:
sari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
H5J25_09350
Messenger RNA biogenesis [BR:
sari03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H5J25_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QQV75833
UniProt:
A0A974NS31
LinkDB
All DBs
Position
complement(1982429..1984618)
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AA seq
729 aa
AA seq
DB search
MTRPAHIARIAEDDDEQFATNANGAGGGERYFNRELSWLAFNRRVLEEACNPAHPLLERV
RFLSISGSNLDEFFMVRVAGLKGQLVQSVDRRSADGLTSGQQLTAIVAEADELIESQRNV
WRELRLQLSDAGIDVLGSRTIDEILTIDEVAWLEKQFREQIFPILTPQALDPAHPFPFMS
NKGLAVMFDLVRVSDNQPIRELIMLPSQMPRFLRVPGERARYVAVESLVKRFAALIFPGY
TVTGGAEFRVLRDSDLEIDDEAEDLVRYFANAIKRRRRGRVIRLELESGMPHALGEALRE
ELGAGHAFVTESGAFLGVGDLESIVDEDRPDLKFPPYSPRFPERIREFGGDCFAAIQAKD
IVVHHPYETFEVVLAFLKQAAADPDVVAIKQTLYRAGKQPAVINALIAAAEAGKSVTAVV
ELKARFDEEQNIVWASALERAGVQVVYGFMEWKTHAKISMVVRREGAVYRTYCHFGTGNY
HPITAKIYTDLSFFTADPRIGADAAQMFNYITGYVEPEGMSLVSLSPRDLRPKLVDLIDA
EIENIRSGKPGAIWAKMNSLVDPAVIEKLYEASNAGVEIDLIIRGICCLRPGVDGMSANI
RVKSVIGRFLEHSRIWAFGNGKMLPNDDAKLFISSADWMPRNFDRRVEYMLPILNPTVHD
QILDQVMVANLIDNEQSWDLKADGSYVREEPGDRPFNLHRYFMTNPSLSGRGAALKGKSV
PKLSLRRGH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccagcccatatcgcgcgtatcgccgaggatgacgacgaacaattcgctacc
aacgccaatggcgcgggcggtggcgaacgctacttcaaccgcgaattgtcctggctcgcg
ttcaatcgccgcgttctggaggaggcgtgcaacccagcgcatccattgctggaacgcgtg
cgcttcctgtccatttccggctccaacctcgatgaattctttatggtccgcgtcgcggga
ttgaaggggcaactcgttcagtcggtcgatcggcggtccgcggacgggctgacgtccggg
caacaactgaccgcgatcgtcgcggaggcggacgagctcatcgaaagccagcgcaacgtc
tggcgcgagcttcgcctgcaattgagcgatgccggcatcgacgtgctgggatcgcgcacg
atcgacgagatcctcacgatcgacgaagtcgcgtggctggaaaaacagttccgcgaacag
atattcccgatcctgacgccgcaagcgctggacccggcgcatcccttcccgttcatgtcg
aacaagggattggcggtgatgttcgacctggtccgcgtgtcggacaatcaaccgatccgc
gaactgatcatgctgcccagccagatgccgcgcttcctgcgcgtgccgggcgaacgcgca
cgatacgtggcggtggaatcgctggtgaagcggttcgccgccctgattttcccgggctac
acggtgacgggcggggcggaattccgggtgcttcgcgacagcgatctcgaaatcgacgac
gaagctgaggatctggtgcgctacttcgccaatgcgatcaaacggcggcggcgcgggcgg
gttatacgtctggagctggaaagcggcatgccgcacgcgctgggtgaggcgctgcgcgag
gaacttggcgcgggccatgccttcgttaccgaaagtggcgcgttcctcggcgtaggcgat
ctggaatcgatcgtcgatgaagatcgcccggatctcaaattcccgccatattcgccacgg
tttccggaacgcatccgcgaattcggtggcgattgcttcgccgcgatccaggcgaaggac
atcgtcgtccatcacccgtacgaaacgttcgaagtggtactcgcctttctgaaacaggcg
gccgccgaccctgacgtggtcgcgatcaagcagaccctgtaccgcgccggcaagcagccg
gcggtgatcaacgcgctgatcgcggcggccgaggccggcaagtccgtgaccgccgtagta
gagttgaaggcgcggttcgacgaggagcagaatatcgtctgggcctccgcgctggagcgc
gccggggtgcaggtcgtctacggcttcatggaatggaagacgcacgccaagatttcgatg
gtcgtgcgacgcgaaggcgctgtctatcgcacctactgccatttcgggaccggtaactat
catcctatcacggcaaaaatctacaccgatctcagcttcttcaccgccgaccctcgcatc
ggggccgatgccgcgcagatgttcaattacatcaccggctatgtcgagccggaggggatg
agcctcgtcagcctgtcgccgcgcgatctccggcccaagctggtggatttgatcgatgcc
gagatcgagaatattagatcgggaaagcccggcgcgatctgggcgaagatgaactcgctg
gtcgatccggcagtgatcgagaaattgtacgaagcgagcaatgccggtgtcgagatcgac
ctgattattcgcggcatctgctgcctgcgccccggcgtggacggcatgtctgcgaacatt
cgcgtcaagtcggtgatcgggcgctttctggaacacagccggatctgggcgttcggaaac
ggcaagatgctgcccaatgacgacgcgaaactgttcatctcgtccgccgactggatgccg
cgcaatttcgatcggcgcgtcgaatatatgctgccgatactgaacccgacggtgcacgac
cagatcctggatcaggtgatggtcgccaacctgatcgacaacgaacaaagctgggatctg
aaggcggatgggagctatgttcgcgaagaaccgggtgaccgtccgttcaatttgcaccga
tactttatgaccaatccgtcgctttccggtcgcggcgctgcgctcaagggcaaatccgtt
ccgaagctgtcgctgcgacgcgggcattga
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