Sarcina sp. JB2: HH195_06670
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Entry
HH195_06670 CDS
T06935
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sarj
Sarcina sp. JB2
Brite
KEGG Orthology (KO) [BR:
sarj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sarj03009
]
HH195_06670 (rimO)
Enzymes [BR:
sarj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HH195_06670 (rimO)
Ribosome biogenesis [BR:
sarj03009
]
Prokaryotic type
ribosomal protein modification factors
HH195_06670 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF2004
NARF
Motif
Other DBs
NCBI-ProteinID:
QPJ85619
LinkDB
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Position
complement(1487892..1489226)
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AA seq
444 aa
AA seq
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MTKYKVGMVSLGCDKNRVDSEIMLGQVEREYELTNNPKEADIIIVNTCGFIEKAKQESIN
TILDMAKYKIKYKCKLLIATGCLTQRYGKELLDLMPELDIVLGVNDYEKINKAIEGFIKE
NKKISSTNFTNEGINEGKRIITTNKSSAYLRIAEGCNNFCTYCIIPKIRGKFRSRKIENI
IEEGKILANAGVKEIILIAQDTTNYGIDLYNEKRLHIVLRELSKIEGIEFIRVMYCYPEA
IYGELIEEISKNDKVCKYLDLPIQHISNDILKRMGRKTSKEEIIDKIKTLRENVSNIVLR
TSLIVGFPGETEKDFNELKEFLKEMKLDKVGVFTYSQEEDTPAALMENQIDEKIKQQREK
ELMEVQKEISKAINKSKVGRTYKVLVESENSDYFIGRSYEMAPDIDGLIYIKEKNLKANK
FYDVKIKEALEYDLIGVVLNESCK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatataaagttggaatggttagcctaggctgcgataaaaatagagttgattca
gaaattatgctagggcaagtagaaagggaatatgaattaactaataatcctaaagaggca
gatataattatagtaaacacttgtggatttatagaaaaggctaaacaagaatccataaat
actatattagatatggcaaaatataaaataaaatataaatgtaagcttttaatagctaca
ggatgtttaactcaaagatatggaaaagagcttttagatcttatgccagagcttgatata
gtcttaggagttaatgattatgaaaaaataaataaggctattgaaggatttataaaagag
aataaaaagatttcttcaacaaactttactaatgaaggaataaatgaaggcaaaagaata
ataacaactaataagagtagtgcttatttaagaatagcagagggttgtaataatttttgt
acttattgtataattcccaaaataagaggaaaatttaggagtagaaaaattgaaaatata
atagaagaagggaaaattcttgcaaatgcaggtgttaaagaaataatactaatagcacaa
gatacaaccaattatggtatagatttatataatgagaaaaggcttcatatagttttaaga
gaattaagtaaaatagaaggaattgaatttataagagttatgtattgttatcctgaggct
atttatggtgaattaatagaagagataagtaaaaatgataaagtgtgtaaatatttagat
cttccaattcaacatataagtaatgatatattaaagagaatgggtagaaagacaagtaaa
gaagaaattatagataagataaaaacattgagagagaatgtttctaatattgtattaaga
acatcattaatagttggatttccaggggaaacagagaaagattttaatgaattaaaagaa
tttttaaaagaaatgaagttagataaagtaggagtatttacatattcacaagaagaagat
acaccagctgcactaatggaaaatcaaatagatgaaaaaattaagcaacaaagggaaaaa
gagcttatggaggttcaaaaagaaatatctaaagcaatcaataaaagtaaggtcggaaga
acttacaaagtattagtagaaagtgaaaatagtgattattttataggaagaagttatgaa
atggctccagatattgatggattaatttatataaaagagaaaaatttaaaagctaacaaa
ttctatgatgtaaagataaaagaagcattagagtatgatttaataggggtggttttaaat
gaatcttgcaaataa
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