Salmo salar (Atlantic salmon): 100136461
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Entry
100136461 CDS
T04363
Symbol
esr1
Name
(RefSeq) estrogen receptor 1
KO
K08550
estrogen receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100136461 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100136461 (esr1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
100136461 (esr1)
Nuclear receptors [BR:
sasa03310
]
3. Estrogen like
3A. Estrogen receptor
100136461 (esr1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Oest_recep
Motif
Other DBs
NCBI-GeneID:
100136461
NCBI-ProteinID:
NP_001117064
UniProt:
Q4ZHP9
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Position
ssa06:66958234..66981696
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AA seq
623 aa
AA seq
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MLVRQSHTQISKPLGAPLRSRTTLESHAISPPKLSPQQPTTPNSNMYPEETRRGGGAAAF
NYLDGGYDYTAPTQGPAPLYYSTTPQDAHGPPSDGSMQSLGSSPTGPLVFVSSSPQLSPF
LHPPGHHGLPSQSYYLETSSTPLYRSSVVTNQLSASEEKLCITSNRQQSYAAAGSGVRVF
EMANETRYCAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTMDRNRRKS
CQACRLRKCYEVGMVKGGLRKDRGGRVLRKDKRYCGPAGDREKPYGDLEHRTAPPQDGGR
NSSSSSLSGGGGWCGPRITMPPEQVLFLLQGAEPPALCSRQKVARPYTEVTMMTLLTSMA
DKELVHMIAWAKKVPGFQELSLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLIL
DRSEGDCVEGMAEIFDMLLATVSRFRMLKLKPEEFVCLKAIILLNSGAFSFCSNSVESLH
NSSAVESMLDNITDALIHHISHSGASVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSIKC
KNKVPLYDLLLEMLDGHRLQSPGKVAQAGEQTEGPSTTTTTSTGSSIGPMRGSQDTHIRS
PGSGVLQYGSPSSDQMPIPLEQK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcagacagtcccatacgcagatttccaaacctctcggagctcctctcagatcc
cgaacgaccctggagagccacgccatctcccccccaaaactctcaccacagcagccgacc
acccccaacagcaacatgtaccctgaggagacacgcagaggtggtggggcggccgccttt
aactacctggacggagggtatgactacacagcccctacccaaggcccggcccccctctat
tactccaccaccccccaggatgctcacggacccccctcggatggcagcatgcaatccctg
ggcagcagtcccaccggcccactggtgtttgtgtcctccagcccccagctcagccccttc
ctccaccccccaggccaccatggtctccccagccagtcatactacctggagacttcttcc
acacccttatacaggtcgagtgtggtaaccaatcagctgtcagcgtcagaggagaagctc
tgcatcacctccaataggcagcagtcgtacgctgcggcagggtcaggggtcagggtgttt
gagatggccaacgagacgaggtactgtgcggtctgcagcgactttgcctctgggtaccac
tacggagtttggtcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcac
aatgactacatgtgccctgcaactaaccagtgtacaatggacaggaatcgtaggaagagc
tgccaagcatgccgcctcagaaagtgttatgaagtggggatggtgaaaggaggcttgcgt
aaggaccgtggtgggcgggttctcaggaaggacaagcggtattgtggccctgctggtgac
agagagaaaccctatggtgacctggagcacaggacagcgccccctcaggacgggggtagg
aacagcagcagcagcagcctcagtggtggtggaggatggtgtgggcccagaatcaccatg
cctcctgaacaggtgctgttcctgctgcagggggcagagcctccggccctgtgttctcgt
cagaaggtggcccgcccctacacagaggtcaccatgatgaccctgctcaccagcatggcc
gacaaggagctggtgcacatgatcgcttgggctaagaaagtaccaggtttccaggagctg
tctctccatgaccaggtgcagctgctggagagttcctggctggaggtgctgatgatcgga
ctcatatggaggtccatccactgccctgggaaactcatctttgcccaggacctcatactg
gacaggagtgaaggggactgtgtggagggtatggctgagatcttcgacatgctcctggcc
actgtgtctcgcttccgcatgctcaaactgaagcctgaggagtttgtgtgcctcaaagcc
atcatcttgctcaactctggtgccttctccttctgttccaactctgtggagtcccttcac
aacagctcggcagtggaaagcatgctggacaacatcaccgacgccctcatccaccacatc
agccattcaggagcctctgtgcagcagcagccaagacggcaggcccagctcctgctcctg
ctctcacacatcagacatatgagcaacaaaggcatggagcacctttacagcataaaatgt
aagaacaaagtgcctctgtacgacctgctcctggagatgctggacggtcaccggctccaa
tccccaggcaaagtggcccaagctggggaacagaccgagggcccctctaccaccactacc
acctccacaggctccagcatagggccgatgcgaggtagccaggatacccacatcagaagc
cctggttcgggggtactccagtatggctcccccagctcagaccagatgcccattcctcta
gaacagaaatag
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