Salmo salar (Atlantic salmon): 106564936
Help
Entry
106564936 CDS
T04363
Name
(RefSeq) integrin alpha-L-like
KO
K05718
integrin alpha L
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04514
Cell adhesion molecules
sasa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106564936
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106564936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106564936
04515 Cell adhesion molecules [BR:
sasa04515
]
106564936
04090 CD molecules [BR:
sasa04090
]
106564936
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106564936
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin alpha subunits
106564936
CD molecules [BR:
sasa04090
]
Proteins
106564936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Copine
FG-GAP_2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
106564936
NCBI-ProteinID:
XP_013986946
UniProt:
A0A1S3L7J3
LinkDB
All DBs
Position
ssa12:complement(23260251..23282831)
Genome browser
AA seq
1208 aa
AA seq
DB search
MSRQGPLSLLTWMVAMAVSSMAFNIDEANPKIYKGEEQDFFGYKVLQFISDKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLHITSNFTPAFQECTKKIVDLVFLFDGSGSMTRDEFDKNKGFIN
NIMTTLTNSSIKFAAVQFSTNTRTVFNFHDYQEGRALTKLSREVHMADLTNTHKAIDFVL
KNIFENQAAGATADATKVLVIITDGNPSDNDRRLNSIRRSDEKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIMDYNGLKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
NKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGQILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNTDFLLVGAPM
FHQPPREGRIYVYTLTDKLELRTEMSVSVLAQGRFGSSISSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQAIDGKMDLGEDGLTDIVVGA
RGAVVVLRSRPVLSISAHLHFHPLEISTNNFDCLAEETISPVVTLTACFNMAEATKSKAE
VLSAGMNFSYSLNVDPVRQRSRAFYSDTNKGARSILSTVELRKQRTCFNHSVYMTQCVID
TLSPIVIKLNLSQSESQQEGRTAILNTASPTQAVVEVPFEKNCKENETCVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSLPVYRSKTTAVFTSKFHILSTYDWNDTMEMSVIGLSDNGNSTNSSLTRT
IPVQFAVDLVAKALPQDSTTYINFTLEDTSPKGLVNVYEVQNLGFKSVPVTVTFTFPTKL
EHRFEMKDYQISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLKKLLTVTFVLSGN
VSFKDLDQRSLSLPKKFTGDREKVNFISFVKLSYDKKRYVQTASDPGDNSTSFHQTQIDV
QAEMIIPPHTALIKGTGVGVGLFLLIIITMAMYMLGCFKRKRLVDNAQEDENEGEQREQD
DAVQPIKICVTITEIKLEPESEPETGAVDSNPLLDDSQTENNGFPTSEAVGEGPKEKQDV
SVRSRLME
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaggggcccctctccctgctcacctggatggtagccatggctgtctcttca
atggctttcaacattgatgaagcaaacccaaaaatctacaagggggaggaacaggatttc
tttggttacaaagtcctgcaattcatttctgacaaagagaaaggggtaatggtcagtgct
ccatatcagaagaacggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgacacaatcaagtacattggactgtctatggct
ggacaatctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccacatcacc
tcgaacttcacacctgccttccaagaatgtactaagaaaatcgtggacctcgttttcctc
tttgacggatcaggaagcatgacaagggatgaatttgataagaacaaaggtttcataaac
aatatcatgacaaccctaacaaactcctcaatcaagttcgcagcggttcagttctcaaca
aacaccagaacagttttcaactttcatgactaccaagagggaagagccttgactaaactt
tcgagagaagtgcacatggctgatctaaccaacacacataaggcaatagactttgtctta
aaaaacatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagtgataatgatagaaggttaaactctatcagaagaagt
gatgagaaaaacatcatccgctttgtcatcggggtcaagaatgtcgatttgacgaaatta
aagtccctggcatcagagccaaaagagaacaacactttcctcatcatggactacaacgga
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggcaacttgactaaagagatgtctcagagtgggttcagcgctgtctacgtt
aataaggacaccttggttttgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagac
tcctatatgggatactctgtagctgttgggaagaagaatgagaatcttctatattttacc
ggagcaccaagatctgaacacatgggacagatcctactttttaacaaggttaacaacaac
tggactgtggcacaaagattgtctggagaacagatgggctcctacttcggggcagagctg
tgctctgtggacatagactcagacggcaacacagacttcctcctggtgggtgcaccaatg
tttcaccaaccaccgagagagggcaggatctacgtctacacactgactgacaagctggaa
ctgaggacggagatgagtgtttcagtgctggctcagggtagattcggctcctccatctcc
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggtgctccacttgag
gacgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
gcgattgatgggaagatggacctgggtgaggatggactgactgacatcgtagtaggagcg
cgaggcgcagttgtcgtcttgaggtccagaccggtcctcagcatctctgctcatctccac
ttccatcccttggagattagcactaataactttgactgtctggcagaagagaccatttct
cctgtggtgactttgacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcaggaatgaacttctcctactcgctgaatgtggatccagtgagacagagg
agccgagccttttacagtgacacaaacaaaggggccagaagtattctctctactgtggag
ctgagaaagcagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccatagtcatcaaacttaatttatctcaatctgaaagccaacaagagggt
cgtactgccattctgaatactgccagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaacatgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggacgactcctacaacaccagtctaaccctcctctaccctcctggcctctcattc
tccatgatgcatcttctgaagtccacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtcagcctccctgtctaccgtagtaaaactaca
gctgtgttcaccagtaaattccatattttgagtacatacgactggaatgacacaatggag
atgagcgtcattggactgagcgacaatggaaactcaaccaatagttccctaaccaggacc
atccctgttcaatttgcagttgacctggtagcaaaagcccttccccaagactccaccact
tacattaactttactctggaggacacatcacctaaaggactggtgaatgtatatgaggtg
cagaacttgggatttaagtctgtaccagtcacagtcaccttcactttcccaactaagctt
gagcacagatttgaaatgaaggactaccaaatatctgtcttacagaaccacactcaatgt
ggaaaggttatcaattcaacaacagagtactgctctccagaaaaatactgcaagtccatc
gagtgtgaaagcttccttttgaagaagttgttgacagttacgtttgtgctgtctggaaat
gtttccttcaaggacctcgatcaacgtagcttgtcattgccaaagaaattcactggggat
agagaaaaagtcaacttcatcagttttgtcaaactcagctatgacaaaaaacgatatgtc
cagacagcgagtgacccaggggataactctacaagcttccaccaaacacagattgatgtt
caggctgagatgatcattcctccacatacagcgctgataaaagggacaggagttggagta
ggactctttctcctgatcatcatcacaatggccatgtatatgctgggatgtttcaagaga
aaaaggcttgttgataatgcacaggaagatgagaatgaaggggaacagagggagcaagat
gacgctgttcagcctatcaagatctgtgttaccataacagagataaagctagagcctgag
agcgagcctgagactggagcagtggattcaaatcctctccttgacgacagtcaaacagaa
aacaatggctttcccactagtgaggcggtaggtgaggggccaaaagagaaacaggatgtg
tcagtcagaagcaggctaatggagtag
DBGET
integrated database retrieval system