Salmo salar (Atlantic salmon): 106567688
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Entry
106567688 CDS
T04363
Symbol
hlcs
Name
(RefSeq) holocarboxylase synthetase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00780
Biotin metabolism
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
106567688 (hlcs)
Enzymes [BR:
sasa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
106567688 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
106567688 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
106567688 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
106567688 (hlcs)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
106567688
NCBI-ProteinID:
XP_013992747
UniProt:
A0A1S3LP74
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Position
ssa13:complement(68292842..68339482)
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AA seq
988 aa
AA seq
DB search
MTIYSGKSFSVNNREATVRSNLSRGEAIPYGLKNGFPNVKKMLITLCYVYLWVRFQKCYT
VVIRSTLHRLCGGSKTNASNVSFTFCALNPLGKPRLQKGQPTSLQSVNKQLSPPLPEEDV
FLKLGDKAIYITEPQACEDLSKWTLLWGSSLSCGPRIENISFIIEATSGQRVGSQAHHTT
ENKKVLKWSDYCLPLACSPVQPFRAVAQASVDNFSRLGVAFMEDRLQLDNGLVPSKIVSV
LLRESAFKELLEKGKSEKHISSLNLKKQTEIILSEPSPCEWEVLSVRGDLQLTQNRKCSL
LQPPEIQRALVERRGSEPLRGVSPGVDSGDNSLGINHQHMEGHGRHLHLSSCHECLELEN
STILSVKYASVDNIPDLPDDYATCTDSGDETLDEFEEDEAESFVGQSRRVNVTGKPPNVL
VFTGGCQERFQRVRSLLGECIDMDSYTVYPLRPQQALSEPWLESAILLVLASDEPLTPQL
QARFLAYLEQGGRVLGLSSTLCPTGLALVPRNSRRSQICRLSFTKADTTELDLSVLASGS
VFVREPQSGGDPGETEVWGELKLDGDGGDKDMVIVRVTRGEDRGEAVLCQVHLETAPNSE
DIVSSQGFDELKMSNARRYEVLTEIITSLGLSCEQCQAPPASPVYLLATSEERRASFLKW
LHTQLDKEGLLKCSKAFLKVVPSAELQAGPPLLPKGTLALVTDAPEAQSWEQFSLQTYSQ
HLETRTLGRTLLYTQVTPTTMDLLEGLMLQLPEKMGLTAIAARQTQGRGRGGNAWLSPLG
CAMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYGNLM
KLGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVMQHNRERGTSLEALSSAQLIG
RTLTCLEQLISDFQDRGSEAVLPLYYKRWVHNGTQVRLWSEDGPQAVVVGLDDNGFLQVR
SEEQGVVSVQPDGNSFDMLRNLVVTKQR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttatagtgggaagagcttttctgtcaacaacagggaagctacggtcaggtcg
aatctgagcagaggagaggccataccatatgggctcaaaaacggctttccaaatgtaaag
aaaatgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacaca
gtggtaattcggagcaccctgcacagattgtgcggggggagcaaaaccaatgccagtaac
gttagcttcacattctgtgccttgaatccactggggaagcctcgacttcagaaaggacaa
ccaaccagcctgcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgtt
tttctcaagttgggcgacaaggctatttacataaccgaacctcaggcatgtgaggacctc
agcaagtggactcttttgtgggggtcctctctgagttgtggcccgcggatagagaacatt
tctttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactaca
gaaaataaaaaagtgctgaagtggtcagactactgtctgcctttggcctgtagcccagtg
cagccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggtggcg
tttatggaagatcgccttcagctggacaatggactagtgccttcaaagatagtctctgtc
ctgctccgagaatctgcattcaaagaacttctggagaagggaaagtcggaaaagcacatc
tcttccctcaacctcaaaaaacagactgagatcatcctctctgagccttctccctgcgag
tgggaggtactctcagtgagaggcgacctccagctaacacaaaataggaagtgcagcctg
ctccaaccgccagagatccagagggctttagtggaaagacgaggctccgagcccctacga
ggagtcagccctggggtggacagcggggacaactcacttggcatcaaccaccagcacatg
gagggccacggccgccacctccacctctccagctgccacgagtgcctggagctggagaac
agtaccatcctttccgtcaagtacgcctcggtcgacaacatccctgaccttcccgacgac
tacgccacgtgcacggacagcggggacgagactctggacgagtttgaggaggacgaggca
gagagctttgttggtcaaagccggcgggtcaacgttaccgggaagccccccaacgtgctg
gtgttcacgggtggctgccaggagaggttccagagggtgcgttcgctgctgggcgagtgc
atcgacatggacagctacacggtgtaccccctaaggccccagcaagccctcagtgaaccc
tggctggagagtgcaatcctgctagtgctggcctcagacgaaccccttaccccccagctc
caggcccgtttccttgcatacctagagcagggtggcagggtcctggggctctcctccacc
ctctgccccacggggctggccctggtgcccaggaacagcaggaggagccagatctgcagg
ctaagcttcaccaaggctgataccacagagctggatctgagcgtgcttgccagtgggagt
gtgtttgtcagggagccgcagagtggtggggaccctggagagacggaagtctggggggag
ctgaagttggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtgga
gaggaccgaggggaggctgtgctgtgtcaggtgcacctggagacggcccccaactctgaa
gatattgtgtcgtctcagggttttgacgagctgaagatgagcaatgcgcggcgctacgag
gtcctgacggagatcatcacctccctgggcctgagctgtgagcagtgtcaggccccgccg
gccagccctgtctacctcctcgccacctctgaggagcgcagggccagcttcctcaagtgg
ctgcacacccagttggacaaagaagggctgctcaagtgttccaaggcattcctcaaagta
gtccccagcgcagagctccaggctgggccccccctgctgcccaaggggaccctggccctg
gtcacggacgccccagaggcccagagctgggagcagttcagcctgcagacctacagccag
cacctggagacccgcacgctgggacggacccttctctacactcaggtcacccctaccaca
atggacctactagaggggttgatgctccagctgcctgagaaaatggggttaactgctatc
gcggctcgacagacccagggtagaggccgtggggggaatgcgtggctaagtcctctggga
tgtgccatgtttagtgtgcatgtgcaagtggctgtgagttccagactgggccagaggatc
cccttcctgcagcacctggctgccctggccgtggtggaggccgtacgcacccttcccggt
taccaggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatg
aagctaggaggagtgttggtgacatcaacagtcatggggccaaccttccatctcctcatt
ggctgtggctttaacgtcagcaacagcaaccccaccattgccatcaacgacctggtgatg
cagcacaaccgagagcgtggcacaagcctggaggcccttagctcagcccagctcattggc
cgcaccctcacctgcctggagcagctcatctctgacttccaagatcgggggtcagaggcc
gtcctacccctctactacaagagatgggtgcacaatgggacccaggtgcgtctgtggagt
gaggatggcccccaggctgtcgtagtgggcctcgacgacaacggcttcctgcaggtgcgc
tccgaggagcagggcgtggtctccgtgcagcctgacggcaactcctttgacatgctaagg
aacctggtggtcaccaagcaacgctag
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