Salmo salar (Atlantic salmon): 106572102
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Entry
106572102 CDS
T04363
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106572102
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106572102
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
PcfK
RasGEF_N_2
PKcGMP_CC
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
106572102
NCBI-ProteinID:
XP_014001416
UniProt:
A0A1S3MEQ6
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Position
ssa15:71737677..71791180
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AA seq
1869 aa
AA seq
DB search
MLICYRCKCTVFCIEAYRMAFCQNRLTSAMAAYLGIFILALSVVGQQLPSSPHGCMEGSC
YPATGNLLIGRAINLSATSTCGLHGPEHYCIVSHLQELDKCFACNSQRPYEPYYHKNSHR
VENVIQLKDSNEDLTWWQSVNGEEGVSIRLNLEAEFHFTHLIMKFKTFRPAAMLIERSAD
FGRSWRPYRYFAYNCTKTFPRVPTHALHYINDVICEERYSDIEPSTEGEVIYKVLDPAIH
VKDPYSLEIQELLRITNLRINFTKLHTLGDNLLDRRSDVLQKYYYSLYELVVRGSCFCYG
HASECAPVPGVDARDSGMIHGRCVCKHNTEGLNCERCRDFHNDLAWSPAEANDPHTCREC
NCNGHSSQCHFDMAVYLATGNAGGGVCDHCLHNTMGRNCEMCKPFYYKDPSRDIRDPAAC
TACDCDPVGSMEGGVCDSHTDLDMGMIAGQCRCKLNVKATRCDYCKEGYYGLAHNDPQGC
QPCNCDPRGTIMLGAPCDQVSGSCSCKRYVTGRHCNQCLPEYWGLGNDLAGCRACDCDFG
GAYSNRCMVENGQCDCRRHLIGRQCSDVQPGYFCAPLDYYKYEAEDAIGHSPSDHNLPGK
ARPQAEVDCVEHLNNQLRRHRRHRRIATTQQQRAALRRIRQLQQTPDVRSVHRERSQGHM
VTWTGPGFARVKDGAGLVFTIDNIPYAMEYDIMIRYEPESTEDWEAIVSVTSLLLPTSPR
CGNLLPTEQLYTVTLPHNRRYVQMPRPFCFEPSNRYVVAIRFQRHGVSQRHLTAFILVDS
LVLIPKYTELPGFQGNDPAAEERRDEMVRYMCLDSFMAMPMPMLAEMCTKLICSISAILH
DGALQCQCDPQGSLSAECDRVGGQCRCKPNVIGQRCDQCAPGTYGFGPYGCTACDCHSQG
SLGHQCDPVTGQCPCRQGASGRQCSDCQPGQWGFPSCRPCQCNGHTDDCNPQTGECQNCR
DYTDGQYCERCVKGFFGNPVLGSGDHCRPCPCPGNPGSGHSNGDSCHTDISSNQILCNCK
QGYTGSRCERCAPGYYGNTERPGGQCRPCQCSGNIDTQDPESCDPRTGQCLSCLYNTDGA
SCSDCKRGYFGNALAQDCRRCTCVTAGTQQSYCPDGHCHCDRQTGACPCRDNVVGHNCDQ
CAPDHWNYGTDRGCERCGCHPLHAMGSHCNMFSGQCHCQQGFGGRQCTECEQFHWGDPRV
QCEECNCHSLGSEMAQCDRVTGVCECREGAVGRRCDECARGFTGVFPKCVRCHPCFELWD
DAVCMIRRDLDHIRHEIHKILESGETPGVGDKRIRELENKLAQVQDLIIQDGDSDRLHQL
IGQSIDDLRAEIALTDGRLMGVARELNGTAVQDEELRRNLTQMERELRDLNTTLMHQRQK
QESNLSSGFQDQFDNVKKYYSESQKAQQKCSASVSGPFSPVEESKATRAHTEDLLNKRRD
KFLRTVAAQKKSLSELQNKAQDVDKKVHHLSHKVCGGHSNASSNGTCHDSPCGGAGCHDN
DGRRVCGGDGCDGTVSASLKGLKHANDVTDNLTAASEDLQGMAKKLQDIAMLTQDVKNQA
MDTLDKAQKKKDLFENSNKKLKEFIQKIKDFLTEEGADPESIEKVAQQVLAISLPVNRTT
LDSMVQQIKDNINNLTDVEGVFNHTSQQLQQVKELLNRAKDAKTRAEGVKDTANTTKQAL
DASEKAIQKATKALDQALNNLNSTRNTTATVEENLQDLEVKQMDAMMRLANLSMGVEALK
TKTDQNREMAQDAKDQAENATNAASGLEQRLNETEDRYKELQMKVDSLGGASGGLGNVNQ
RAKEIKKEAEDLLTKANKGIETLRKLEKKFRNNEQKMLDQQSELGELERNATEAREAIRK
QVQTYNNCN
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgttaatctgttacagatgcaaatgtacagtgttctgtattgaagcctaccggatggcc
ttctgtcaaaatcgactgacatccgccatggcagcatatctgggcatatttattttagct
ctgagtgttgtgggacagcagctcccctccagcccgcatggctgcatggagggcagctgt
tacccggcaacaggcaacctgttgattggccgagccattaatctcagcgccacctccact
tgtggtcttcatgggcctgaacactactgcatagtcagccacctgcaggaattggacaag
tgttttgcgtgtaactctcagcggccttatgaaccgtactaccacaaaaacagtcaccgc
gtggagaacgtcatccaactcaaggacagcaacgaagacctcacatggtggcagtccgtc
aacggtgaggagggtgtcagtatcagactcaatctggaggcagaattccacttcactcac
ctcatcatgaagtttaagacattccgacctgccgccatgctgattgagcgttcggctgat
tttggtcgctcctggagaccgtaccgttattttgcctacaactgcaccaagacgttccca
cgcgtgcccacccatgccctccactacatcaatgatgtcatctgtgaggagagatactct
gacatcgagccctccacggaaggagaggtcatttataaagtcctcgaccctgccatacat
gtgaaagacccatacagtctggagattcaagagctgttgcggatcaccaacctgcggatc
aacttcaccaagctgcacaccctgggagataacctgctggaccggcgctctgacgtgctg
cagaagtactactactccctgtatgagctggtggtgaggggcagctgcttctgctacgga
cacgcctcagagtgtgcccccgtgccaggggttgatgccagggacagtggcatgatccac
gggcgatgtgtgtgtaaacacaacactgaggggttaaactgtgaacgctgcagagacttc
cacaacgacctggcctggagcccagccgaggccaacgaccctcacacatgcagagaatgc
aactgtaacggtcactccagccagtgtcactttgacatggcggtgtacctggccacgggc
aatgccggcggtggcgtctgtgaccactgtctccacaacaccatgggacgcaactgtgag
atgtgtaaaccattttactacaaggaccccagcagggacatcagagaccccgccgcttgt
actgcgtgtgactgtgaccctgtgggttccatggagggaggtgtgtgtgacagccacaca
gacctggacatgggcatgatcgccgggcagtgccgctgtaagctcaacgttaaggccacc
cgctgtgactactgcaaggagggttactacggcctggcccacaacgacccacagggctgc
caaccgtgtaactgtgaccctcgtgggaccataatgctgggagcgccatgtgaccaggtc
agcgggagctgctcctgtaagagatacgtcacaggccgccactgcaaccagtgtttgccg
gagtactggggtctcgggaatgacctagcaggctgccgggcctgtgactgtgactttggt
ggagcctacagcaacaggtgtatggttgaaaatggccagtgtgactgtaggaggcacctg
attggtcgtcagtgttctgacgtgcagcctgggtacttctgtgctccgctagactactac
aaatacgaggcagaggacgccattggccactcacctagtgaccacaaccttccgggcaag
gccaggccccaggctgaggttgactgtgtggagcacctcaacaaccagctgaggagacac
agacgccacagacgcatcgccaccacccagcagcagagggcagcactgagacgcatccgc
cagctgcagcaaacgcctgatgtaaggagtgttcacagggagagatctcagggtcacatg
gtcacctggactggacctggttttgcccgggtcaaggatggcgctggactggtcttcaca
atagacaacatcccctatgccatggagtatgacatcatgatccgctatgagccagagtct
actgaggactgggaggccatagtgagtgttacctccctgctgctgcccaccagcccccgc
tgtggcaacctgcttcccactgaacagctctacactgtcaccctgccgcacaacaggagg
tatgtccagatgcccaggcctttctgctttgagcccagtaaccgttatgtcgtggccatc
agattccagcgtcacggagtgtcccagagacacctgactgctttcatccttgttgattcg
ctggtgctgatccccaagtacacggagctgcctggtttccagggtaacgaccccgcggcg
gaggagcgccgtgatgagatggtgcgctacatgtgtctggactccttcatggccatgccc
atgcccatgctggcagagatgtgcaccaagctcatctgcagcatctctgccatcctgcat
gatggagccctgcaatgtcagtgcgacccgcaggggtctctcagtgctgagtgtgacagg
gtcggaggtcagtgtcgctgtaaacccaacgtgattggacaacggtgtgaccagtgtgca
cctggcacttacggctttggaccatatggctgtactgcctgtgactgccattcccagggc
tctctggggcaccagtgtgacccggtgacggggcagtgcccctgcagacagggggccagt
gggcgccagtgttcagactgccagcctggccagtggggcttccctagctgcaggccatgc
cagtgtaacggtcacactgatgactgcaacccgcagacaggggagtgccagaactgcaga
gactacactgatggacagtactgtgaaaggtgtgtgaagggtttctttgggaacccagtg
ctggggtctggagatcactgtcgaccatgtccctgtcctgggaacccaggaagtggacac
tccaatggggactcctgtcacactgacatctcatccaatcagatcctctgcaactgtaaa
cagggatatacaggctctcgctgtgaacgctgtgcccctggttactatggcaacactgag
cgcccaggcgggcagtgccgcccgtgccagtgcagtggcaacatcgacacccaggaccca
gagtcatgtgaccccaggacaggacaatgcctgagttgcctgtacaacacagacggcgcc
tcctgctccgactgtaaacgtggttacttcggcaacgccctggcccaggactgcaggcgt
tgcacctgtgtaacagcaggtacacagcagtcctactgccctgacggtcattgccactgt
gacagacagacaggggcatgcccatgtcgggacaacgtggtcggccacaactgtgaccag
tgtgcccccgaccactggaactatggcacagacagggggtgtgagcgctgtggctgccat
cctctgcacgctatgggatcacattgcaacatgtttagtggacagtgtcactgtcagcaa
ggctttgggggaaggcagtgcactgagtgtgagcagttccattggggagacccacgtgtg
cagtgtgaagagtgtaactgtcactctctgggctcggagatggcccagtgtgaccgtgtg
acgggggtgtgtgagtgtagggagggggcggtggggcggcggtgtgacgagtgtgcccgc
gggttcaccggggtattccctaagtgtgtccggtgccacccctgctttgagctgtgggac
gacgcagtgtgtatgatccgccgggacctggaccacatccgccatgaaatccacaagatc
ctggagagcggagagacgcccggggtgggagacaaacgcatccgcgagctggagaacaaa
ctggcccaggtacaggacctgatcatccaagacggagactcagacagactacaccagctg
attggccagtccatcgatgacctcagagcagagatagctctgactgacggccgtttgatg
ggtgtggcccgggagctgaatggaacagcggtgcaggacgaggaactgaggaggaacctg
acccagatggagagagaactcagagacctcaacaccactctgatgcaccagcgccaaaaa
caggagagcaaccttagctctggtttccaagatcagtttgacaatgtgaagaagtactac
agtgagtcccagaaggctcaacagaagtgcagtgcctcagtgtccggtcctttcagcccc
gtggaggagtctaaagccacacgcgcacacaccgaggaccttctgaacaagaggcgggat
aagttcctgcgcacggtggcggcccagaaaaaatcactgtcagagctgcagaacaaagcc
caggacgtagacaagaaagtccaccacctgagccacaaggtatgtggtggccattccaat
gccagctccaatggcacatgtcacgatagcccatgtgggggtgctggttgtcatgacaat
gacggtcggcgggtgtgtggaggggacgggtgtgacgggactgttagcgcctccctaaag
ggactgaaacatgccaatgatgtcacagacaacctgactgctgccagtgaggatctccag
ggtatggctaagaagctccaggacattgctatgctgacccaggatgtgaagaatcaagcc
atggacaccctggacaaagcccagaagaagaaggacttatttgaaaactccaataaaaaa
ctcaaggaattcattcagaagatcaaagatttcctgactgaggagggtgcggacccagag
agcatagagaaggtggctcagcaggtgctggccatatcacttcctgtcaacagaaccact
ctggacagcatggtccagcagattaaagacaacattaacaacctgacagatgtagagggg
gtcttcaaccacacctcccagcaactccaacaggtcaaggagctgctcaaccgagctaag
gatgccaagacacgagcagaaggagtgaaggacacagccaacacgactaagcaggcgttg
gatgcatctgaaaaggctattcagaaagcaaccaaagccctggaccaggccctaaacaac
ctcaacagcaccaggaacaccaccgcaacggtggaggagaatcttcaggatctggaggtc
aagcagatggatgctatgatgcgactggccaacctgtcgatgggggtagaggcactaaaa
actaagaccgatcagaacagggagatggcccaagatgccaaggaccaggctgaaaatgcc
actaatgcagcatcaggactggagcagaggctgaatgaaacggaggatcggtacaaggaa
ctgcagatgaaggtggactctctgggtggggcctcggggggcctggggaacgtcaaccag
agggccaaggagatcaagaaggaggctgaagacctgctcactaaggccaacaagggcata
gaaacgctacggaagctggagaagaagttccgtaataatgagcagaaaatgctggaccag
cagagcgagctaggagagctggagaggaacgccacggaagcacgggaggccatacgaaag
caggtgcagacatacaacaactgtaactga
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