Salmo salar (Atlantic salmon): 106573964
Help
Entry
106573964 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106573964
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106573964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106573964
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106573964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
106573964
NCBI-ProteinID:
XP_014004918
UniProt:
A0A1S3MNX3
LinkDB
All DBs
Position
ssa16:43830808..43955501
Genome browser
AA seq
1154 aa
AA seq
DB search
MNLIFSRLLAYFYFGFQVILQFYINPCHLHPQPCHILAQIGNTVRLGALLPTRQTARVQA
ALNRALAGLAQTGDNFLPFNLSLEVVPQEPAKGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEHGEPLKTQNRFHLQMVTRIPPSGLSELLLAVLQRSGW
QEGMAVLCQGWEEDGLLELLDLQSHLGCGATRWQLRALLNLTRAGPAESQIQDFLSEHFR
GQGPSQIPPPAAVLLFGGDPECAAAVLQSAQDLGLTLPTVHWVLGYPLSPDALHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGRAVSAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLQRDVVGQPTWVTVGSWEGGRL
EVEDQGLWQGHNGKGHGRGEGHGGRGGGRWRAGSPVAGSRVRVVTLVEHPFVFTREVDED
GNCPAGQYCLDAGTNSSDMLERYFSERATGNSTFLPTDYGKCCYGYCIDLLEKMSEDMRF
EYDLYIVGDGKYGASKSGRWSGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSL
GILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRV
FSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKT
FEELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLK
VDPPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISR
YKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEH
AFYHIVLPHIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQGANTEKSCDIQKKQHPQPP
PDPPSPGASAKWNESSRDSAAAAAKDKRVHFNLETLNSRRLLARAVAESEGGRGESAGCD
TNPRTNPATRVCANGGFGTSFASLVLSLPSSSSSIPSSSSGVPLRPGELQELQERIDLIR
DQLRTALARRAELQTSLAKEKAACSAPIVTGMTSVVVATAALPSTRCATTMTDPVLKSLP
TVRTTSAIHTNEKS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattattggcatacttttacttcggattccaagtcattcta
cagttctacatcaacccttgtcacctccatccccagccgtgtcacattctggcgcagata
ggaaacaccgtgcgccttggtgcccttctgcccacccgccagacggccagggtgcaggct
gccctgaaccgcgccctcgccggtctcgctcaaactggggacaactttctacctttcaac
ctgagcctggaagtggttccccaagagccagcaaaaggagaccccgagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgtgctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcatttttggaaataccttttataagc
atcattgaacacggagagcctctgaaaacacagaaccgcttccacctacagatggttact
cggatccccccgtcgggcctgtcggagctgctgctggccgtcctccagcggagcggctgg
caggagggcatggccgtgctgtgccagggttgggaggaggatggcctgctggaactactg
gacctccagagccacctgggctgtggcgccacccgttggcaactccgcgccctcctcaac
ctcacccgtgctggcccagcagaatcccaaatccaggacttcctttcagaacacttccgg
ggccaaggcccaagtcagatcccaccgccggccgcggtgctgctgtttgggggcgaccca
gagtgtgcggcggcggtgctgcagagcgcccaggacttggggctgacgctgcccacggtg
cactgggtgctgggctacccactgagccccgacgccctgcactccatcggcctgcccctg
ggtctgctggcctacggtgaagtggagcgcaagccactggacttctacatccgcgacgca
ctccagctggtaggccgggcagtgtcggcggccacagtggtgcgcccagacctggcgctc
atccagaacatggtcaactgctacgacaaacccaacaagcacgaggtgccctcctccgga
cagtacctcgccaggttcctgtccaacacgtcgttctcagggctgacggggccagtgtcg
gtgcagaggaacctatcccgagttctcacctctcagcgattccacatctggagcctgcag
cgggacgtggtgggccagcccacctgggtgacagtgggcagctgggaggggggccgcctg
gaggtggaggaccagggcctgtggcaagggcacaatggcaagggccatggccggggggaa
ggccatggggggcggggcgggggccggtggcgagccggcagtcctgtggcaggcagccgg
gtgcgggtagtcaccctagtggagcaccccttcgtattcacgcgggaggtggatgaggac
gggaactgtccggcaggacagtactgcctggacgcagggacaaacagctcagacatgctg
gagcgctacttcagtgagcgtgccacgggcaactctaccttcctgcccacggactacggc
aagtgttgttacggatactgcatagacctgctggagaaaatgtcagaggacatgcgcttc
gagtacgacctgtacatcgtgggcgacgggaagtacggtgcatcgaaaagcggccgctgg
agtgggctggtgggtgacctgctcaatggcgtggccgacatggccgtcacctcattcagc
attaactcagtacgcagccgtgtcatcgacttcacctcgcccttcttctccacctcgctg
ggcatcctggtgcgcagcaaggacacggcggcgcccatcggcgccttcatgtggcccctg
cactggtctatgtgggtgggcatcttcgtggcactgcatatcaccgccctcttcctcacc
ctctatgagtggaagagcccatttggcatgacgccacacggacgcaaccgcctgcgtgtc
ttctcctactcgtctgcgctcaacctgtgctacgccattctgtttggccgcacggtctcc
agcaagacgcccaagtgctggacgggtcggtttctgatgaacctgtgggccatcttctgc
ctgctggtgctgtccagctacacagccaacctggccgccgtcatggtcggcgagaagacc
ttcgaagagctctcggggatccacgacgccaagctccaccacccatcccatggtttccgg
tttggcacggtgagggagagcagcgctgaggagtacatgaagaagagtttcccagagatg
cacgagtacatgaggcgctacaatgagcccaccacacccgatggagtgtccaccctcaag
gtagatccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtg
tccatcgatgcagactgcaagctgctcactgtgggcaagcccttcgccatcgaaggctat
ggaataggcctaccacagaactcccctctaaccaacaacgtgtcagagttcatcagtcgc
tacaagtcagacggctacatggacatgctgcatgacaagtggtacaaggtggtgccttgt
gggaagagggtgttcgccgtcaccgagactctccagatgggcatccgtcacttctcaggg
ctgtttgtgctgctgtgtgtgggcgtggccacatcactgctcaccctggctggggaacac
gccttctatcacattgtgctgccacacatccgacgacgacagaagtacaagtactggctc
cacaccagccagaaaatccaccgagccctgaaccagacctatgaggatgtgaagaagaag
cagggcgccaacacagaaaaaagctgcgacatccagaagaagcagcacccccagcctccc
ccagaccccccttcccccggcgcctcggccaagtggaacgagagcagcagggactccgct
gctgcagccgctaaggacaagcgagtccactttaacttggagaccctcaacagccgccgc
cttctagcccgagccgtggctgagtctgaaggggggagaggggagtcggctggatgcgac
actaaccctaggaccaacccggccacacgggtctgtgcgaatgggggcttcggaacttcc
tttgccagcctggtgctatccctcccctcctcttcttcatccatcccttcttcctcctca
ggcgttcctctgaggccgggagagctgcaggagctgcaggagaggatcgacctgatccgg
gatcagctgaggacggctctggccaggagggctgagctgcagacttccctggccaaggag
aaggctgcctgctccgcccccatagtgacgggaatgacctccgtggttgtagctactgca
gccctcccctccacccgctgtgccaccaccatgacagaccctgtcctcaaatccctgccc
acagtccgcaccacctctgccatacacactaatgagaagagctga
DBGET
integrated database retrieval system