Salmo salar (Atlantic salmon): 106578676
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Entry
106578676 CDS
T04363
Name
(RefSeq) hemicentin-1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106578676
04147 Exosome [BR:
sasa04147
]
106578676
04090 CD molecules [BR:
sasa04090
]
106578676
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
106578676
Cilium and associated proteins [BR:
sasa03037
]
Other cilia and associated proteins
Stereociliary proteins
106578676
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106578676
Exosomal proteins of bladder cancer cells
106578676
CD molecules [BR:
sasa04090
]
Proteins
106578676
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sasa00537
]
Antigens
106578676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_6
Ig_4
Motif
Other DBs
NCBI-GeneID:
106578676
NCBI-ProteinID:
XP_014013239
UniProt:
A0A1S3NCR6
LinkDB
All DBs
Position
ssa02:15499085..15512803
Genome browser
AA seq
1565 aa
AA seq
DB search
MDHPLVWVLILVLLNFTTGVSGQVVVPSMNPLAVGSNVTLNLVPESPINIGTWSYETTAI
VLFYPGGSIVSTSYQGRVSFNRSSSELSINSLQLNDSGRYTVQGMEPVLKAVVTLSVQEP
ISNVTLRANATDLVELNDTSIFTCSVSSGTSLSYRWMNGSSEVAASDRVRLGVGNSTLSI
VSVTRYDEGPFRCEVINGISNGTSQPIGLNVRYGPSNLTMMVVPEMTIGHTAYMMGSVIT
LSCSAQSKPAVSYKWRFNGVFLNDQSPQLSLQNTRENQTGSYACLAHNNVTLRYASMTTM
IKIVEPISAVSLNRDGKLPILDQSFTLRCEVTGPVVYIHWLINGQLISLNNRTFFSTDNK
TMVINPIQFSDSGEYLCEAFNAVSNLTSMTYKLVVNFGPERPDVTSPAIAMTGHIVTFNC
SASSQPPSQFSWFFNGSQVASGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTVV
EPVTMAMVKVMGAQPITDYLFTLTCETTGTIYSIHWMKNGWPLYADNRTDFSMDNNTLTF
NSVEDSDNGDYQCSAYNPLSNMTSPEYRLIVNYGPERPVIMSPDIAMTGHIVTFNCSASS
QPPSQFSWFFNGSQVASGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTIIAPVT
MTMVKVIGSQPILNERFSLTCGTTGTVYSIHWMRNGGPLYADNRTDFSMDNNTLTFNSVE
DSDNGDYQCSAYNPLSNMTSPEYRLIVNYGPERPVIMSPDIAMTGHIVTFNCSASSQPPS
QFSWFFNGSQVASGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTVVEPVTMAMV
KVMGAQPIADYLFTLTCDTAGTIYSIHWMKNGWPLYADNRTDFSMDNNTLTFNSVEDSDN
GDYQCSAYNPLSNMTSPEYRLIVNYGPEMPVITGPAFGETGHIVTFNCSASSQPPSQFSW
FFNGSQVASGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTVVEPVTMAMVKVMG
AQPIADYLFTLTCDTAGTIYSIHWMKNGWPLYADNRTDFSMDNNTLTFNSVEDSDNGDYQ
CSAYNPLSNMTSPEYRLIVNYGPERPVIMSPDIAMTGHIVIFNCSASSQPPSQFSWFFNG
SQVASGSVYETGPLTLASHGEYTCVAFNNITVRNSTVSKMLTIIAPVTMTMVKVIGSQPI
LNERFSLTCGTAGTVYSIHWMRNGGPLYADNRTDFSMDNNTLTFNYVQHSDIGDYQCSAS
NPLSNMTSPNYRLIVNYGPEMPVITGPAFGETGHIVTFNCSASSQPPSQFSWFFNGSQVA
SGSVYETGPLTLASHGEYTCVAFNNVTVRNSTVSKMLTIIEAITSVTVKRNRLPIASDNL
TLTCDVTGRYDTIYWMKDNLSLVLNNTLNSDITISNNSLHFSPVKVSNDGNYQCVATNLF
GPNTSPKYQLLVNYGPKSVNISGPVSVVIGSVITVTLKCSADSRPTSEYGWKFNNQSVLG
TGPMMAVIASLENAGDYTCVAKNPVTNISMSNTISLDVTGHSLAPPFQSRGGLMLTALLA
LSLCL
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcctctggtgtgggttctcatcctggtgctgctcaacttcacgacaggtgtc
tctggccaggtggtggttccctctatgaaccccttagctgtgggcagtaatgtcaccctg
aacctagttcccgaaagccccatcaacatagggacctggtcatacgaaactacagccatc
gtacttttctatcctggtggcagtattgtgagtacaagttatcaaggcagagtctcattc
aaccgctcctcctcagagctgtccataaactctctccaactcaacgactcaggacgatat
accgtgcagggaatggagccagtcctgaaagctgtggtgactttgtctgtccaggagccc
atttcaaacgtgactctaagggccaacgccactgatctagtggaattaaacgacacttcc
attttcacctgctccgtctcctctggcacctccctctcctaccgctggatgaatggcagc
tcagaggttgcagccagtgacagagttcggcttggagttgggaacagcactctctccata
gtcagtgtgacacgatacgatgaagggccattcagatgtgaggtcatcaatggaatcagc
aatggcaccagccagcccattggcctcaatgttagatatggcccaagtaacctcaccatg
atggtagttcctgagatgaccataggacatacagcctacatgatgggctctgtcatcact
ctgtcctgctccgctcagtccaaacccgctgtgtcctacaagtggaggtttaatggggtg
ttcctcaacgatcaaagtccacagctgagcctgcagaacaccagggagaaccagacagga
agttacgcatgcttagcccacaacaatgtcacactccgatacgcctccatgaccacaatg
ataaagatcgtggagccgatatcagcggtgtcgttgaatcgtgatgggaagctaccgata
ctggatcagtccttcactctgcggtgtgaggtgactggacctgtagtctacattcattgg
ttgattaacggccagctcatctccctaaacaacagaacattcttctctacggacaacaag
acaatggttatcaacccaatccagttttctgacagtggagaatatctctgtgaggccttt
aatgctgttagcaacttgaccagcatgacatacaagcttgtggtgaactttggaccagag
agacctgacgtaactagtccagctatagcaatgacaggacacatcgtgaccttcaactgc
tctgcctcctctcagcctcccagccagtttagctggttcttcaatggctcccaggtggcg
agtggctcagtgtatgagactggcccactgaccttagccagtcatggggagtacacctgt
gtggccttcaacaacgtcactgtcagaaacagcactgtctccaagatgctcactgttgtt
gaacctgtaaccatggccatggtgaaagtcatgggtgcccagccaataacagactacctg
tttactctgacctgtgagaccactggaaccatttactccattcactggatgaagaacggc
tggcctctgtatgctgataacagaacagacttctctatggacaacaatacactaaccttc
aactctgtcgaggattctgacaacggagactatcagtgttctgcctacaaccccctcagc
aacatgaccagcccagaatacagactgatcgtcaactacggtccagagagacctgttatc
atgagtccggatatagcgatgacaggacacatcgtgaccttcaactgctctgcctcctct
cagcctcccagccagttcagctggttcttcaatggctcccaggtggcgagtggctcagtg
tatgagactggcccactgaccttagccagtcatggggagtacacctgtgtggccttcaac
aacgtcactgtcagaaacagcactgtctccaagatgctcaccatcattgcacctgtgacc
atgaccatggtgaaagtcattggatcccagccaatactgaacgagagattctctctgacc
tgtggcaccactggaacggtttactccatacactggatgaggaacggcgggcctctgtat
gctgacaacagaacagacttctctatggacaacaatacactaaccttcaactctgtcgag
gattctgacaacggagactatcagtgttctgcctacaaccccctcagcaacatgaccagc
ccagaatacagactgatcgtcaactacggtccagagagacctgttatcatgagtccggat
atagcgatgacaggacacatcgtgaccttcaactgctctgcctcctctcagcctcccagc
cagttcagctggttcttcaatggctcccaggtggcgagtggctcagtgtatgagactggc
ccactgaccttagccagtcatggggagtacacctgtgtggccttcaacaacgtcactgtc
agaaacagcactgtctccaagatgctcactgttgttgaacctgtaaccatggccatggtg
aaagtcatgggtgcccagccaatagcagactacttgtttactctgacctgtgacaccgct
ggaaccatttactccattcactggatgaagaacggctggcctctgtatgctgataacaga
acagacttctctatggacaacaatacactaaccttcaactctgtcgaggattctgacaac
ggagactatcagtgttctgcctacaaccccctcagcaacatgaccagcccagaatacaga
ctgatcgtcaactatggaccagagatgcctgttataacaggaccagcatttggagaaaca
ggacacatcgtgaccttcaactgctctgcgtcctctcagcctcccagccagttcagctgg
ttcttcaatggctcccaggtggcgagtggctcagtgtatgagactggcccactgacctta
gccagtcatggggagtacacctgtgtggccttcaacaacgtcactgtcagaaacagcact
gtctccaagatgctcacggttgttgaacctgtaaccatggccatggtgaaagtcatgggt
gcccagccaatagcagactacttgtttactctgacctgtgacaccgctggaaccatttac
tccattcactggatgaagaacggctggcctctgtatgctgataacagaacagacttctct
atggacaacaatacactaaccttcaactctgtcgaggattctgacaacggagactatcag
tgttctgcctacaaccccctcagcaacatgaccagcccagaatacagactgatcgtcaac
tatggtccagagagacctgttatcatgagtccggatatagcgatgacaggacacattgtg
atcttcaactgctctgcctcctctcagcctcccagccagttcagctggttcttcaatggc
tcccaggtggcgagtggctcagtgtatgagactggcccactgaccttagccagtcatggg
gagtacacctgtgtggccttcaacaacatcactgtcagaaacagcactgtctccaagatg
ctcaccatcattgcacctgtgaccatgaccatggttaaagtcattggatcccagccaata
ctgaacgagagattctctctgacctgtggcaccgctggaacggtttactccatacactgg
atgaggaacggcgggcctctgtatgctgacaacagaacagacttctctatggacaacaat
acactgaccttcaactatgtccagcattctgacatcggagactatcaatgttctgcttcc
aaccccctcagcaacatgaccagcccaaactacagactgatcgtcaactatggacccgag
atgcctgttataacaggaccagcatttggagaaacaggacacatcgtgaccttcaactgc
tctgcctcctctcagcctcccagccagttcagctggttcttcaatggctcccaggtggcg
agtggctcagtgtatgagactggcccactgaccttagccagtcatggggagtacacctgt
gtggccttcaacaacgtcactgtcagaaacagcactgtctccaagatgctcaccatcatt
gaggctataacgtcggtgacggtgaaacgaaacagattaccaatagcatctgacaaccta
accctgacctgtgatgtcaccgggcgctatgacaccatctactggatgaaggacaacctg
tctctggtcctgaacaacaccttgaactctgacataaccatctctaacaactctctgcac
ttcagtccagtcaaggtgtctaacgatggaaactatcagtgtgttgccaccaacctcttt
ggtccaaacaccagccctaaataccagctactggtgaactatggccctaagagtgtgaat
atctctggcccagtctcagtggtgattggctcagtaatcacagttacactgaagtgctct
gccgactcccggccaaccagcgagtatgggtggaaattcaacaaccaatcagttcttggg
actggtcctatgatggctgttatcgcctcattggagaatgcaggggactacacttgtgtg
gccaagaaccctgtgaccaacatctcaatgtccaataccattagtctggatgtcactggc
cattcacttgcccctccattccagtccagaggtggtctgatgctgacagccctgctagct
ctctctctctgcctttga
DBGET
integrated database retrieval system